Gene Plav_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1086 
Symbol 
ID5453953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1191666 
End bp1192037 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content63% 
IMG OID640876655 
Productresponse regulator receiver protein 
Protein accessionYP_001412364 
Protein GI154251540 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAA TTCCGACAGT CGCGATCGTC GACGACGACG GCGGCGTCCG CACATCCCTG 
ACCAGCCTCG TCAGGTCGCT CGGCTACCAG GTCCGCGCTT ATACCTCGGC GCGCGAGTTC
CTCGACGACA AGCAATCGCC GGAGCCCGAC TGCATGATAG CGGACATCCA GATGCCGCAT
ATGACGGGCG ATCGGTTGCA GGCTGTTCTG AGCTCCAGCG GCCGGTCCTT CCCGATCATC
TTCATGACCG CCTTCCCAAG CGAAGCGGTA CGGGATCGCG TTATGGCTGC CGGCGCCCGG
GATTATCTCG AAAAACCCCC CGACAGCGAC GTGATCGCCC GTCGGCTCGC CGATCTGTTG
GGCCCCCGAT AG
 
Protein sequence
MLKIPTVAIV DDDGGVRTSL TSLVRSLGYQ VRAYTSAREF LDDKQSPEPD CMIADIQMPH 
MTGDRLQAVL SSSGRSFPII FMTAFPSEAV RDRVMAAGAR DYLEKPPDSD VIARRLADLL
GPR