| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1084 |
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| Symbol | |
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| ID | 5455725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1189701 |
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| End bp | 1191188 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876654 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001412363 |
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| Protein GI | 154251539 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCGA GCAGCCCGCA AACCGCAAAG CAGCCGGCCG ATGATGTTGC GTCTGTTATT
GTGCGCCCCG GCACGGGTGC ACTCATGACG AACACGCTCT ACCGCCTTGC CGCCGTCGCG
ATGGCGGTTT TCATCTTTCT GGTCGACTTG TCACCTATCG CTGGCGCGGT TGCTGTTCTC
TATGTTCTCG TTATCCTCAC CGCATCTCGG GTGCAACGTG TCGAGGAAAT CGTCGCCGCC
GCCAGTCTCA GCATTGCACT GACCATCGCG GCTTATCTTC TGTCCCACGA TCTCGGTACG
CTGGGGCCCG CTACGCTGCG GGCCGGTGTC AGCATCGGCG CCATCGCCAT CGCGACGCTG
CTTACGCTTC AGAATCTCGC CGCCACCCGT GCGCTGTCGT CGCAGGCGCG CCTGCTCAAC
TTGTCGCACG ACATGATGTT CGCGCGAGAT CCGTCCGGTC TCGTCACGTT CTGGAACCAC
GCCGCGGAAG CCACTTATGG CTGGGCGGCC TCCGAGGCGG TCGGCCGCTC CGCCGATGAG
TTGCTCCAGA CGCGATATCC CGAAAACCGC GATGCCATCG AGACATGCGT GATCGGGAGC
GGCCGGTGGG AGGGGACGCT TGAACACCGC ACAAGAACCG GGGCATGGCT CGTCCTCGAA
AGCCGGTGGG CAGCGGAGTA CGACAGTCGC GGCCGCATGG TCCGCGTACT GGAGACCCAC
ACCGACGTCA CGGAGCGCAA CCAGGCCCAG GATTCGCTTA ATCTGGCGCG GGCCGAATTG
GCCCATGCCA CACGCGTGGC GACCCTTGGC GAGCTGACCG CGTCCATCGC ACATGAGGTC
AACCAGCCAT TGATGGCGGT CGTCACCAAC GGCGAAGCCG GCCTGCGGTG GCTGCGCCGC
GATCCGCCCG ATTTGACGGA AGTCGAAATG GCAATCGGGC AGGTGGTTGC CGAGGGCCGC
CGCGCCGGTG AGATCGTCAA GCGGGTCCGG GAGTTTCTCA GGAAGGCCCC GTCGCGTCCC
GCGGATATCG ACGTCCTATC TCTCGTCGAG GACGCAGCCG CACTGGTCCG ACATGATCTC
GCCCGCGCAG AGGTTACCCT CACCTTGGCC ATCGAGCCGG ATATTCCGAA GATTCGAGGC
GACCGGGTCC AGTTCCAGCA GGTGCTGGTC AATCTGATGG TGAACGCGGC TCAGGCGATG
GCCGACCGGA CGCTGCCCCG CCGTCTCGCG GTCGATGCGA GGCGGAACGG AACGGCGGCG
GTCGAAGTCC TCGTCAGGGA CAACGGTCCC GGTATCGCTC CGGAACATCT GGAGCGTCTG
TTCGAACCCT TCTTCACAAC AAAACCGGAC GGCATGGGCA TGGGGCTCGC GATCTGTCGC
ACCACGGCAG AAACATATGG CGCCACCCTC TCGGTCGAGA GCGTCTTGCA CGAAGGCACG
GCCTTCCGCT TCTCCATTCC CGTCATGCAG CAGGAGATGA AGCCATGA
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| Protein sequence | MSSSSPQTAK QPADDVASVI VRPGTGALMT NTLYRLAAVA MAVFIFLVDL SPIAGAVAVL
YVLVILTASR VQRVEEIVAA ASLSIALTIA AYLLSHDLGT LGPATLRAGV SIGAIAIATL
LTLQNLAATR ALSSQARLLN LSHDMMFARD PSGLVTFWNH AAEATYGWAA SEAVGRSADE
LLQTRYPENR DAIETCVIGS GRWEGTLEHR TRTGAWLVLE SRWAAEYDSR GRMVRVLETH
TDVTERNQAQ DSLNLARAEL AHATRVATLG ELTASIAHEV NQPLMAVVTN GEAGLRWLRR
DPPDLTEVEM AIGQVVAEGR RAGEIVKRVR EFLRKAPSRP ADIDVLSLVE DAAALVRHDL
ARAEVTLTLA IEPDIPKIRG DRVQFQQVLV NLMVNAAQAM ADRTLPRRLA VDARRNGTAA
VEVLVRDNGP GIAPEHLERL FEPFFTTKPD GMGMGLAICR TTAETYGATL SVESVLHEGT
AFRFSIPVMQ QEMKP
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