| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1068 |
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| Symbol | |
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| ID | 5456464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1174264 |
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| End bp | 1175532 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876638 |
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| Product | Na+ dependent nucleoside transporter |
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| Protein accession | YP_001412347 |
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| Protein GI | 154251523 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTT TGTCTCTTCA GAGCGCCCTC GGGCTCGCGG CCATAATCGT CCTCGCCTGG
GCGCTGAGCG AGAACCGCCG GGCCTCCCGC CGCTCTCTGG CGGTGGATGC CGCCATCGCT
CTCGCGCTCC AGATCGGGGT GGCGCTGGTC CTGCTCAAGC TGCCCTTGGC GCGCGACGCG
CTGGTCGGCC TCAACAGTGT CGTCGAGGCC TTGATGGCGG CGACCTCCGC GGGCACCGGC
TTCGTCTTCG GCTATATCGG CGGCGGCGCC GCGCCCTTCG AAATAGTCTA TCCGCAAAAC
AGCTTCGTTC TTGCCTTTCA GGCCTTGCCG CTGGTCCTCT TCATGTCGGC GCTCTCGGCG
CTCCTCTGGT ACTGGCGGGT CCTGCCGGTC CTCACGCGAG GCTTCGCGGT CCTGCTGCGC
AAGACCATGG GCATCGGCGG CGCGGTCGGT CTTGCCTCCG CTGCCAATGT CTTTGTCGGG
ATGGTGGAAG CGCCGCTCCT CATAAAGCCC TATCTGGAGC GCCTCTCCCG TTCAGAGCTC
TTTGCCGTCA TGACGGTCGG CCTTGCCACC GTCGCTGGCA CCGTTCTCTT CCTCTATGCC
AGCATCATCG CGCCCGTGGT GCCCGGATCG CTCGGCCAGA TCGTCACGGC CTCGCTCATC
TCGCTCCCCG CCGCCCTGCT GATTGCCCGC CTGATGGTGC CGGAAGAGAC GGGACGCACA
CCCACCGGCG TCGGTGACGA TGTGCCCGTG GTCGACTATG AAAACAGCAT GGATGCCCTC
ACGCGGGGTA CCTTCGAAGG CCTCCATCTG CTGCTCAACA TAATTGCCAT GCTTCTGGTG
ATGGTCGCCT TCGTCGCGCT TCTCAATATT CTGCTCGCGC TGCTGCCTGA TGCCGGCGAT
GCCCCGCTCA CACTGCAGCG TCTCTTCGGT TGGGTTTTCG CGCCGCTTGT CTGGCTTATG
GGTGTGCCAT GGTCAGAGGC GCCTGCCGCC GGCCAGATCA TGGGCATCAA AACGGTCCTG
AATGAACTTC TCGCCTATAT CGCACTCGCG GGAGAGGCCG GCGCGGGCTT GAGCGAGCGC
TCGCGCCTCA TCATGGTCTA CGCGCTCTGT GGCTTCGCCA ATCCGGCCAG CGTCGGCATC
ATGATCGGCG GCCTCACCGC CATGGCCCCG TCGCGACGCT CCGAGATCGT CGAGCTCGCG
CCGCGTGCCC TCATCTCCGG CACTCTCGCA ACCTCCATGA CGGGCGCGGT GATCGGCCTC
ATTACCTGA
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| Protein sequence | MTLLSLQSAL GLAAIIVLAW ALSENRRASR RSLAVDAAIA LALQIGVALV LLKLPLARDA
LVGLNSVVEA LMAATSAGTG FVFGYIGGGA APFEIVYPQN SFVLAFQALP LVLFMSALSA
LLWYWRVLPV LTRGFAVLLR KTMGIGGAVG LASAANVFVG MVEAPLLIKP YLERLSRSEL
FAVMTVGLAT VAGTVLFLYA SIIAPVVPGS LGQIVTASLI SLPAALLIAR LMVPEETGRT
PTGVGDDVPV VDYENSMDAL TRGTFEGLHL LLNIIAMLLV MVAFVALLNI LLALLPDAGD
APLTLQRLFG WVFAPLVWLM GVPWSEAPAA GQIMGIKTVL NELLAYIALA GEAGAGLSER
SRLIMVYALC GFANPASVGI MIGGLTAMAP SRRSEIVELA PRALISGTLA TSMTGAVIGL
IT
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