| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1019 |
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| Symbol | |
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| ID | 5455267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1114790 |
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| End bp | 1116292 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640876589 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001412298 |
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| Protein GI | 154251474 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGA GTGGGACTGG AGAGGAGCTT CCGCGTGGTT TAATCGAGTC TGGCCCGGAA
ACCAGTTTCG CCGCGCATTC CCGGCGCCCC AGCCGCCTGC CGATCGGACG CAAAAGCAGC
TATGGTGCGG GACAACTTGT CGAACTAATC ATCGAAAGCA CGCTCAACAT TTTCGTGCTT
TTCTATGCGA CGGCCGTTTG TGGATTGCCG GGCGGGCTCG CAGGTCTTGC GATCGGTGCT
GGAGTAGTGA TCGATGCGGT TGTAAACCCA GTGATCGGAT CTCTTTCCGA CGGTTGGCGC
TCGCGCTTCG GCCGGCGGGT TCCATTCATG GTCGTCTCAT TGGCGCCGAT CCTTCTTACG
TTTAATCTAA TTTTTGCGCT CCCATCAGGG CTCTCGCAAA CCGAACTATT CCTGTGGCTC
ATGCTGTTGT CGGTGTCTTT GCGCATCGCG CTGTCAGTAT TTACCGTACC CTATCTGGCC
CTCGGCGCTG AGCTCACTGA CGATTATGAT GAGCGCTCAT CGGTTGCGGC ATGGCGTTGG
GGCATCGGCA TCATGGGCAC TGTGGCCGTG ATCGTGCTCG GCTACGGTGT ATTTTTTGCC
GGGCCAGGCG GCGTGTCGAA CCGCGCAGCA TACCTGCCGC TAACGTTGAC ACTGAGCGCA
ATACTGTTGG CAGGCGCGCT TGTCTCCATC CGACAGGCAC TTGCGGCGCG GGAGTTGGAA
CATGAGGTCG TGGCCTCAAC CCAAGCGATC CATCTCCGGC TCTTCGGTGA AATGAGCGAG
GTATTCCGCC ATCGGACCTT TCGCATCCTG TTTGCCGCAG CCTTGCTGTT CAACATTGAA
GCGGGGATGT ATCAGGCGCT GGGGCTGCAC GTTATAACCT TCTTCTGGCA ATTGAACCCC
ACGCAAATCC AGGGGATAGG GATGGCCTCT GTGCTTGGAT TAGTGCTTGG AGCTCCGATC
GCCGGACTGA TTTTGAAACG CATTGAAAAG CGAACGATGC TTATGTCCAG CATGATCGGC
ATGGTGGCCT GCCACGCATT GCCAGCGCCC TTCAAGATGC TCGGACTGCT ACCGCTGACC
GGGGGCGCAC TGCTTGGTGT CCTCGCTGTC GTGGCGTTTC TAGCGGGAGT GGCGATGGCG
TTGTCGATTA TTGGATTTGT ATCGATCATC CCCGACGCTG CGGACGAACA CGAATATGAG
TTCGGCACAC GGCGCGAAGG CCTCTATTTC GCAGGTTGGT CGTTTGCCAC TAAGACGGCG
ACAGGAATAG GTGTCTTGAT TGCGGGCGTG GTACTGCAAG TTGTCGATTT TCCACGAGAT
ATCTCTGAGC ACGACGCCGC AGCCGCTGTT TCCGAAGAAA CGGTGACGTG GCTGGCGGTT
GCTCACGGGC CAGGGGCGGC ATTACTATCG TTAGGTGGCA TCGCGTTGGT GCTGCTCTAC
CGCATCAACA AGCGGCGCCA TGCGGGGATC GTTGCCGAAT TGGCTGCGCG CAAGAGCGTT
TGA
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| Protein sequence | MQLSGTGEEL PRGLIESGPE TSFAAHSRRP SRLPIGRKSS YGAGQLVELI IESTLNIFVL
FYATAVCGLP GGLAGLAIGA GVVIDAVVNP VIGSLSDGWR SRFGRRVPFM VVSLAPILLT
FNLIFALPSG LSQTELFLWL MLLSVSLRIA LSVFTVPYLA LGAELTDDYD ERSSVAAWRW
GIGIMGTVAV IVLGYGVFFA GPGGVSNRAA YLPLTLTLSA ILLAGALVSI RQALAARELE
HEVVASTQAI HLRLFGEMSE VFRHRTFRIL FAAALLFNIE AGMYQALGLH VITFFWQLNP
TQIQGIGMAS VLGLVLGAPI AGLILKRIEK RTMLMSSMIG MVACHALPAP FKMLGLLPLT
GGALLGVLAV VAFLAGVAMA LSIIGFVSII PDAADEHEYE FGTRREGLYF AGWSFATKTA
TGIGVLIAGV VLQVVDFPRD ISEHDAAAAV SEETVTWLAV AHGPGAALLS LGGIALVLLY
RINKRRHAGI VAELAARKSV
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