Gene Plav_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1015 
Symbol 
ID5456396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1109088 
End bp1109651 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content68% 
IMG OID640876586 
Productpotassium-transporting ATPase 
Protein accessionYP_001412295 
Protein GI154251471 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.726831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.400726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCT TCATTGCCAG CATCCGCCTC GTCGCGGCCA CCATGCTGAT TTGCGTCGCC 
GGATATTCCG CGGCGGTCTG GGCCGTCGGC CAGGTTCTGA TGCCCGGCAG CGCGCAAGGA
TCGCTGATCG CCGCCGCGGA CGGAAAGGTG ATTGGCAGCA GTCAGGTCGC GCAGAACTTC
ACCGAGCCGC GCTACTTCTG GCCCCGTCCC TCCGCCGTGG ACTACAATGG CGCCGGCGCG
GGCGGCAGCA ACAAGTCGCC GACGAGCACG GATATTGCGG ACCGGGCGCG CGAGACGGTC
GCGCGCTATG GCGCTACCGC GGAAAACCCC TTGCCGGCCG AACTCGCGGC AGCTTCGGGC
GCGGGGCTCG ATCCGCATAT CTCCGAGCGG GGGGCACTCT ATCAGGCGGC GCGTGTCGCG
CAGGCCCGGG GCTTGCCGCA GGCAGGCGTC GAAGCCCTGA TCCACGAACA TGCCTTCGCG
CCGGGCGCCT TCCTGGCGCC GGACCGGCTG GTGAATGTGC TAGAACTCAA CCTCGCGCTC
GATCGGGTCG AGACAGCGGG ATGA
 
Protein sequence
MESFIASIRL VAATMLICVA GYSAAVWAVG QVLMPGSAQG SLIAAADGKV IGSSQVAQNF 
TEPRYFWPRP SAVDYNGAGA GGSNKSPTST DIADRARETV ARYGATAENP LPAELAAASG
AGLDPHISER GALYQAARVA QARGLPQAGV EALIHEHAFA PGAFLAPDRL VNVLELNLAL
DRVETAG