Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0957 |
Symbol | pepN |
ID | 5453413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1032457 |
End bp | 1035093 |
Gene Length | 2637 bp |
Protein Length | 878 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640876528 |
Product | aminopeptidase N |
Protein accession | YP_001412237 |
Protein GI | 154251413 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCG AAGAGCCCCG CCCCATCCGG CTGAAGGACT ATACGCCGCC CGCTTTCGCG ATCGACGAGG TGAACCTCGA TATCGAACTC GATCCCAAGG CGACGAAAGT TCATTCGCGG CTGTCGATGC GGCGGATGGG CGACGGGCCG CTCAGGCTCG ACGGGGAGAA GCTGAAGCTC CTTGAAGTGC GGATCGACGG GGAGAAGCTC GGCGCCAACC GCTACAGCGT GGATGGCGAG CACCTGACGA TTTTCGAGGT GCCGGAGGGC GACTTCACGC TGGAGACGGT GACGAGCTGC GCGCCGGTGG AGAACACGGC GCTGACGGGG CTTTATCTTT CGAGCGACAT CTACTGCACG CAATGCGAGG CGGAGGGCTT TCGCCGCATT ACCTATTATC TCGACCGGCC GGACGTTATG TCTGTATTCC GTACGCGGAT CGTAGCGGAC GAAAAGAAGG TGCCGGTGCT GCTGTCGAAC GGGAACCCGG TGGCGAGCGG CAAGCTGAAG GGCGGCAAGC ACTTCGTCGA GTGGCACGAC CCTTTCCGCA AACCCGCCTA TCTCTTTGCG CTGGTGGCGG GCGATCTCGC CCATGTCGAA GACAAGTTCA CCACCATGTC GGGCCGTGAG GTGACGCTCA GGATTTTCGT CGAGAAGGGC AATGAGGACC GCTGCGACTA CGCTATGGGC GCGCTGAAGC GGGCGATGAA ATGGGACGAG GAAGCCTTCG GGCGCGAATA CGACCTCGAC ATTTTCATGA TCGTCGCGGT GAGCGCCTTC AACATGGGGG CGATGGAGAA CAAGGGGCTC AACGTCTTCA ACGACAAATA CATCCTGGCG CTGCCCGACA CGGCGACGGA TGCCGACTAT GCGGCTATCG AGGCGATCAT CGCGCATGAA TATTTCCACA ACTGGACCGG CAACCGCATC ACCTGCCGCG ACTGGTTTCA GCTTTGTCTG AAGGAGGGCC TCACCGTCTT CCGCGATCAG GAATTCACGG GCGACATGCG CTCGCGGCCG GTGAAACGGA TTTCGGATGT GCGGCTCTTG CGCGCGCACC AGTTTCCGGA AGATGGCGGG CCGCTCGCCC ATCCCGTGAG ACCCGACAGC TATATCGAGA TCAACAATTT CTACACGGCG ACCGTCTACG AGAAGGGCGC CGAGCTCTGC CGCATGATCC ACACCATGGT GGGGCCGAAA CGCTTCCGCA AAGGCATGGA CCTCTATTTC GAGCGGCATG ACGGCGAGGC GGCGACGGTG GAGAATTTCC TCGACGCGCT GTCGGACGGG GCGAAGATCG ACCTCACGCA GTTCAAGCGC TGGTATTCGC AATCCGGCAC GCCGGAAGTT CTGGCCTCCG GGCGCTACGA CGCGGCGCGG AAGACCTACA CGCTGAAGAT GAGCCAGGTG TGTGCGCCGA CGCCGGGGCA ACCGATGAAG GAGCCCTATC ACATTCCGGT CGCCGTCGGC CTTGTGGGCG CGAACGGGCG GGACATGAAA CTGCAGCTCG ACGGCGAGGA GAAGCCGGGC GCGACGACGC GCGTGCTGCA TCTGACCGAA CGGGAAGGCA CATGGCGCTT TCGCAATGTG ACGGAAAAGC CGGTGCCTTC GCTGCTGCGC GGCTTTACGG CGCCGGTGAA GCTCAACGCA CATCTGAAGG AACGCGACCT CGTTTTTCTG ATGCGGCATG ACAGCGACAG CTTCAACCGA TGGGAAGCGG CGCAACGCTA TGCAACGGGG CTGCTGCTCT CGATGGTGGA AGCACGGGCA AGCGGCGGCA CGGCGCGCAA GGGGACGGGC TTCGGCGAGA TGATCCGCGA CCTGCTGACC GCGAAAAAGA TCGACCCGGA TTTCGTGGCG CAGATCATCG CATTGCCGAG CGAGCAGACG CTGGCGCAGA TGATCGGCCG GGATGTCGAT GTGGACGCCA TTCATGGCGC ACGCGAGGAA CTGCGCGCCT CCATCGCGGC GCAGACGAAG GACGAACTGC TTTCGGCCTA TGAGAGGATG AAAGTGGACG GCCCCTATCG CCCCGAGGCG GAGGATGCGG GACGGCGGGC GCTGAGGAAT GTCTGCCTCT CCTATCTCGC GGTGGCGCCG GGCAAAGACG GCGCGGCGCT GGCGGCGGCG CAGTTCCGCG AGGCGGACAA CATGACGGAT TCCATCGCCG CGCTGACGGT GCTGGCAAAT ATCGAGGGGC CCGAGCGGAT TGCGGCGCTC GATGCCTTTT ACAAGCGGTG GCAGAAGAAC CATCTGGTGA TGGACAAGTG GCTGGCGATA CAGGCGACCT CTGCCCTGCC CGGCACGCTG GACGAGGTGA AGCGGCTGAC GCAGCACCCG GCCTTCACGA TGAAGAACCC GAACAAGGTA AGGGCGCTCA TCACCAGTTT CGCCTCGATG AACCAGCTTC ATTTCCACGA CGCCAAGGGG GCGGGCTATG CCTTTGTCGC CGACAAGGTG CTGGAACTCG ACAAGCTCAA CCCGCAGGTG GCGGCGCGGC TGACCGGCGC CTTCAGAAGC TGGCGGCAAT TCGGCCCGAA GCGCCGGAAG CTGATGGTGA AGGAGCTGAA GCGGATTGCT GGGACGGAAG GGTTGTCGCG CGATGTCTAT GAGATCGCGA CGAAGACGCT GGCTTGA
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Protein sequence | MRTEEPRPIR LKDYTPPAFA IDEVNLDIEL DPKATKVHSR LSMRRMGDGP LRLDGEKLKL LEVRIDGEKL GANRYSVDGE HLTIFEVPEG DFTLETVTSC APVENTALTG LYLSSDIYCT QCEAEGFRRI TYYLDRPDVM SVFRTRIVAD EKKVPVLLSN GNPVASGKLK GGKHFVEWHD PFRKPAYLFA LVAGDLAHVE DKFTTMSGRE VTLRIFVEKG NEDRCDYAMG ALKRAMKWDE EAFGREYDLD IFMIVAVSAF NMGAMENKGL NVFNDKYILA LPDTATDADY AAIEAIIAHE YFHNWTGNRI TCRDWFQLCL KEGLTVFRDQ EFTGDMRSRP VKRISDVRLL RAHQFPEDGG PLAHPVRPDS YIEINNFYTA TVYEKGAELC RMIHTMVGPK RFRKGMDLYF ERHDGEAATV ENFLDALSDG AKIDLTQFKR WYSQSGTPEV LASGRYDAAR KTYTLKMSQV CAPTPGQPMK EPYHIPVAVG LVGANGRDMK LQLDGEEKPG ATTRVLHLTE REGTWRFRNV TEKPVPSLLR GFTAPVKLNA HLKERDLVFL MRHDSDSFNR WEAAQRYATG LLLSMVEARA SGGTARKGTG FGEMIRDLLT AKKIDPDFVA QIIALPSEQT LAQMIGRDVD VDAIHGAREE LRASIAAQTK DELLSAYERM KVDGPYRPEA EDAGRRALRN VCLSYLAVAP GKDGAALAAA QFREADNMTD SIAALTVLAN IEGPERIAAL DAFYKRWQKN HLVMDKWLAI QATSALPGTL DEVKRLTQHP AFTMKNPNKV RALITSFASM NQLHFHDAKG AGYAFVADKV LELDKLNPQV AARLTGAFRS WRQFGPKRRK LMVKELKRIA GTEGLSRDVY EIATKTLA
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