| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0954 |
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| Symbol | |
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| ID | 5454794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1027406 |
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| End bp | 1028743 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876525 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001412234 |
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| Protein GI | 154251410 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.650756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.921941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCTGGT ATCATTCGGG CATGTACGAC CCTGCGGTGC CCGTCGCGAG CTTCTGGGAG
GAAGATGCGC CACCTCTTGG CTCTCTCGTC GACCTCGGCC CCAATGGCGA TGAAATCTGC
GACGTCGCCA TCATCGGCGG CGGCTATACC GGCCTTTCCG CCGCCTATCA TCTCGCCCGC
GATTTTTCCG CCGATGTGCG TGTTCTCGAA GCTGGTCCTC TCGGCTGGGG CGCATCGGGC
CGCAATGGCG GCTTCTGCAC GCTTCCGCCC ACCGGCCTCT CGCTCGATCA ATTGATCGCA
CGCTACGGCG AGGTGGAGGC AAAGCGCTTC ATCGCCTCGC AGGTCGAAGC CGTCGAGCTT
GTCCGCACTC TCGCCCGCGA TGAAAACATC GAAATCCAGC CGCAAGGCGA GGGAACTCTC
CACGTTGCGC ACGCGCGGTC CCGTTTCGCC GAACTCGCGC ATGAACGCGA TCTTCTCAAT
GGCACATTCG GTATCGCCGC GCGCCTTCTC CCGCGCGAGG AGGTTGCCGA AGCCCATTAC
GATTCCGCCG AACAATTCGG CGCTCTGCAC AATCCCGTCG GCTTCGGTCT CCACCCGCTT
CGCTTTGCGC GCGGCCTTGC CGAAGCAGCT GCCCGCGCCG GCGCCAGGCT TCACGGACAT
TCGGAAGTGC GGGCATGGGA GAGGGAAGGG GCCTTGCACC GCCTCGTGAC TTCCTCCGGC
ATCATCCGCG CCCGCCGCGT CGTCATCGCC ACCAACGGCT TCACGCGCGA CCGGCTTCAT
CCCATCGCGC GTGATCTCAT CCCCGTCATG TCCAACATAA TCGTCACCCG CCCGCTGACG
GCGGATGAAC TTGCCGCGCA GAGCTGGCAG ACCGAAACCC CCTGTGCCAA TACCCGTCGC
CATCTTTTCT ATTATCGCCT GCTGCCGGAT CGCCGTTTCC TCTTCGGCGC GCGCGGCGAT
CTCACAGGCA AGCCGGAAGA CGGCGCCCAT ATGCGGAGCT TCATGGAGCG TCGCCTCCGC
GAGGTCTTTC CCGGCTGGGC TCATGTTCCG GTTACGCATT ATTGGCGCGG CTTCGTCTGC
ATGGCCCGCC GCCTCACGCC CTCGATAGGC CATCTGCCGG ATGATGAGAG CGTCCATTTC
GCCCTCGGCT ATCATGGAGA TGGTGTTTCC GCCGCGCCCT GGAGCGGCCG CATGGTTGCG
CGGCTCATCG CTGGAAATGC CGATTTCTCA AGTATTCCCG CGCCTTTTCG CGGACCTCCG
GCCCGCATTC CGTTTCCTTC GCTGCGGCGC TGGTATCTTC GTGCTGCTCT CGGTTACTAT
CGTCTCACAG ACCTATAG
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| Protein sequence | MTWYHSGMYD PAVPVASFWE EDAPPLGSLV DLGPNGDEIC DVAIIGGGYT GLSAAYHLAR
DFSADVRVLE AGPLGWGASG RNGGFCTLPP TGLSLDQLIA RYGEVEAKRF IASQVEAVEL
VRTLARDENI EIQPQGEGTL HVAHARSRFA ELAHERDLLN GTFGIAARLL PREEVAEAHY
DSAEQFGALH NPVGFGLHPL RFARGLAEAA ARAGARLHGH SEVRAWEREG ALHRLVTSSG
IIRARRVVIA TNGFTRDRLH PIARDLIPVM SNIIVTRPLT ADELAAQSWQ TETPCANTRR
HLFYYRLLPD RRFLFGARGD LTGKPEDGAH MRSFMERRLR EVFPGWAHVP VTHYWRGFVC
MARRLTPSIG HLPDDESVHF ALGYHGDGVS AAPWSGRMVA RLIAGNADFS SIPAPFRGPP
ARIPFPSLRR WYLRAALGYY RLTDL
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