| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0945 |
|---|
| Symbol | |
|---|
| ID | 5454803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1015598 |
|---|
| End bp | 1016998 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640876516 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001412225 |
|---|
| Protein GI | 154251401 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.564865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCTGA TTAAACTTCT CAAGACCTCG ACCTTCCGGC TCGCGGTCAT CTATCTGGCT
CTGTTCGCCG CTTCGGCGAT CACGCTCCTC GCCTATGTCT ATTGGAATAC CGCCGGCTTC
CTCGCCCGGC AGACCGACGA GGCAGTGGAA GTCGAGATTG CCGGGCTCGC CGATCAATAC
CGGCAGGGCG GCTTGCCGCT TCTCGTCCAC ACAGTCATCC AGCGCTCGCG CGATCCCGGC
CAGAGCCTCT ATCTGGTGCT CGATCCCGCA GGCCGCGTCC TCGCGGGCAC GCTCGATGCG
CGCCCTCAGG TGGAACCTGG CCCGGATGGC TGGTTCGACT TCGACTACAA CCGAAAGACC
CTCGACGGTA TCGAGATAAA GGCCGCGCGC GCCCGCGCAT TCTTTCTGCA GGAAGGCTTC
TACCTCCTCG TCGGCCGCGA TGTGCAGGAG CGGCGCGAGA TCGAAAGTCT CATCACCAAT
GCTCTCATAT GGGCGATCGG CCTCACGGTC GCGCTCGGCT TGGTCGGCGG TCTCTTCATG
AGCCGTAACA TGCTGGCGCG CGTCGACGAC ATCAATAGGT CGAGCCGCGA CATCATGGAG
GGCGATCTTT CGCAACGCCT GCCCATCGCA GGCACAGGCG ATGAGCTCGA CCAGCTCGGC
CGAAATCTCA ACGCCATGCT GGACCAGATC GAAGCTCTGA TGATTGGCAT GCGGCAGGTG
ACGGACAACA TCGCCCACGA CCTCCGGAGC CCGCTCAATC GGCTGCGAAA TCGCCTGGAA
GTCACGCTGA TGCAGGAAGC ATCCGCGGAT GATTACAAGC AGGCGCTCGA AAAAACCATT
GCCGAAGCCG ACAACCTGCT TGGAACCTTC AATGCACTGT TGATGATTGC GCGGGCCGAA
GCGGGTTCGC TCCGAGATTC GATGACATGG GTGGATTTGA GCGAGACGTT GCGCGATGCC
GCCGATCTCT ACGAGCCTGT CGCCGAGGAA TATGATCTTT CCATTTCCAT CGAAACGCCC
GACAGCTTGC AGATTTGGGG CAACCGGGAA CTTCTCTCTC AGGCTCTCGC AAACCTTCTC
GACAACGCCA TAAAGCACGG CATGCCTCAA TCCCACGATG TAGACCGCAG CATCGTCGTC
TCCGCGACGC GCGATCTCCA GCGGCCGGGA CGCGGCGTTC TTCTCTCCGT CGCGGACCGC
GGCGTCGGCA TCCCGGAAAG CGAACGCAAA CACGTGCTTG AGCGTTTCGT CCGGCTGGAG
GCAAGCCGCA ATACGCCCGG CTCCGGGCTC GGCCTCAGCC TCGTCGCCGC CGTCGCACGC
CTTCATGGCG GCACCATCGA GCTTCAACAC AATGATCCGG GCCTCAAGGT CACGCTCTTC
TTGCCTGTTT CAGGCCGCTG A
|
|---|
| Protein sequence | MPLIKLLKTS TFRLAVIYLA LFAASAITLL AYVYWNTAGF LARQTDEAVE VEIAGLADQY
RQGGLPLLVH TVIQRSRDPG QSLYLVLDPA GRVLAGTLDA RPQVEPGPDG WFDFDYNRKT
LDGIEIKAAR ARAFFLQEGF YLLVGRDVQE RREIESLITN ALIWAIGLTV ALGLVGGLFM
SRNMLARVDD INRSSRDIME GDLSQRLPIA GTGDELDQLG RNLNAMLDQI EALMIGMRQV
TDNIAHDLRS PLNRLRNRLE VTLMQEASAD DYKQALEKTI AEADNLLGTF NALLMIARAE
AGSLRDSMTW VDLSETLRDA ADLYEPVAEE YDLSISIETP DSLQIWGNRE LLSQALANLL
DNAIKHGMPQ SHDVDRSIVV SATRDLQRPG RGVLLSVADR GVGIPESERK HVLERFVRLE
ASRNTPGSGL GLSLVAAVAR LHGGTIELQH NDPGLKVTLF LPVSGR
|
|---|
| |