Gene Plav_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0839 
Symbol 
ID5453427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp912084 
End bp912653 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content63% 
IMG OID640876410 
Producthypothetical protein 
Protein accessionYP_001412119 
Protein GI154251295 
COG category[S] Function unknown 
COG ID[COG5402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC TTATCTATTG GGGCTCCGCC CTGGCGGCGG CGCTCGTCCT CGCTCTGGGC 
ACCGCATGGT GGTTCGTCAA CGACTATGGT GGCACCTACC GCTCCGGCGC ATGGACCACA
TCCACCGCCT ATGGCAGCGT TGAGGCGGAT ATGTACACCC GCGCCCGCGT CGCTCTGTTC
GGCCTTCTCG CGCTCGACAA GCGCGAGACC ATGTACTACC AGACCCGAAC CGACAGCGCG
GGCGAGCCCC TGTCAGGCAA CTGCACCTAC CGTCTCGAAG GCAGCGACCT CGCCGCCCAT
TGGTGGAGCA TCACCGCTTA CGATGCCGAC AGCTTTCTGA TCCCCAACGA GCGCAATGTC
TTCTCCTTCT CGCAGACGAC AACGGCGCGC GAACCGGATG GCAGCTTCGT CATCCGCATA
TCCCCCGATC CGCAGGAGAA GAACTGGTTG CCGGTCAAGG CGGGCGAGGG CTTCGACCTC
ACTGCGCGCT TCTACAACCC GCAAGCGTCG ATCTACGCCG ATCCCGCCGC TGCGGTTCTT
CCCATCATCG CGAAGGAAAC CTGCCGATGA
 
Protein sequence
MKTLIYWGSA LAAALVLALG TAWWFVNDYG GTYRSGAWTT STAYGSVEAD MYTRARVALF 
GLLALDKRET MYYQTRTDSA GEPLSGNCTY RLEGSDLAAH WWSITAYDAD SFLIPNERNV
FSFSQTTTAR EPDGSFVIRI SPDPQEKNWL PVKAGEGFDL TARFYNPQAS IYADPAAAVL
PIIAKETCR