| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0731 |
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| Symbol | |
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| ID | 5456241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 797004 |
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| End bp | 797828 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876300 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001412011 |
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| Protein GI | 154251187 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.240935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAG CGAACGGGCG GCAGAGTATT TTCATCACGG GCGCGGCTTC CGGTATGGGG
CTCGAAACGG CGCGGCTCTT TGCGGGCAAA GGCTGGTTTG TCGGCGGCTA TGATGTGAAC
GGCGAAGGTC TGGCCGCGCT GGAAAAGGAG CTTGGCGCCG AGAACTGCGT CGTCGCGAAG
CTCGATGTGA CGGACAAGAA GGCGTTCGAC GCAGCGGTTG CAAGGTTCGG CGAAGCGACC
GGCGGCAAGC TCGACCTGCT CTTCAACAAT GCCGGCATCG GCCGCGGCGG GCTCTTCGAG
CAGATGCCGT TTGAAGACAT TCTGGCCGTC GTGAATGTGA ATTTCGTCGG CGTGCTGAAC
GGCATCTACG CGGCGCTGCC GCTTCTGAAA GCGACGAAGA ATTCGCTCTG CTTCACCACA
TCCTCGTCAT CGGCGACCTA TGGCATGCCG GGCATTGCCG TCTATTCGGC GACGAAGCAC
GCGGTGAAGG GCCTCACCGA AGCACTCTCC ATCGAGTTCC GCCTCATCGG CGTGCGCGCG
GCGGATGTGC TGCCGGGGCT TATCGACACG CCGATCCTGC CGGAAGGCGC GGCCGCAAAT
GCGCCCAAGG AAGGCATGTT CCGCGCGATA CCGCCAGTCG AAGTGGCGAA GGTTGTGTGG
GAGGCCTATG GCTCGGACAA GCTGCACTGG TTCGTGCCGC CGGAGCTTGT GGAGCTCGAC
AAGGCGGCGG GCAATGCGCC CGAGACGACA CGTCAGCAGA TCGCGATGTC GGGGCCGCTG
GCGCCGCTCT TCAAGCAGAT GGAAGCAGAC GCCGCGAAGG GCTAG
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| Protein sequence | MGQANGRQSI FITGAASGMG LETARLFAGK GWFVGGYDVN GEGLAALEKE LGAENCVVAK
LDVTDKKAFD AAVARFGEAT GGKLDLLFNN AGIGRGGLFE QMPFEDILAV VNVNFVGVLN
GIYAALPLLK ATKNSLCFTT SSSSATYGMP GIAVYSATKH AVKGLTEALS IEFRLIGVRA
ADVLPGLIDT PILPEGAAAN APKEGMFRAI PPVEVAKVVW EAYGSDKLHW FVPPELVELD
KAAGNAPETT RQQIAMSGPL APLFKQMEAD AAKG
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