| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0728 |
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| Symbol | |
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| ID | 5455239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 790721 |
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| End bp | 792946 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876297 |
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| Product | glycyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_001412008 |
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| Protein GI | 154251184 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC TTCTGCTCGA ACTCTTCTCC GAGGAAATCC CGGCCCGCAT GCAGAAGCGC
GCGGGCGAGG ACCTTGTGCG TCTCGTCACC GATGCGCTGA AGGCGGCGGG TGTCGAGGGC
AAGAATGCGC GTGCCTTCGC GACGCCACGG CGGCTGGCGC TGGTGATCGA CGGACTGCCG
GACAAGACGC CGGATGTGAA GGAAGAGCGC AAGGGCCCGA AAGTCGGCGC ACCGCAACAG
GCGATCGACG GCTTCCTGCG CGCGGCCGGC CTCGCAAGCA TCGACGAAGC GACGGTGCAG
GAAGACAAGA AGGGCGCCTT CTATGTCGCC GTCACCGAGA AGCAGGGCCG CGACACCGCC
GCGCTGATCG CCGAGATCGT GCCGGCCGTC ATCCGCGCCT TTCCCTGGCC GAAATCCATG
CGCTGGGGCT CGGGCAGCTT GCGCTGGGTG CGTCCGCTGC ATTCGATCCT CTGCCTGCTC
GGCGGCAAGG TGGTGAATTT CGAGGTCGAC GGCATCAAAT CCGGCAACAC GACGCGCGGC
CACCGCTTCA TGGCGCCGGA TGCTTTCGTG GTGACGGATT TTGCCGACTA CGAGATGAAG
CTGCTCGATG CGAAGGTCGT GCTCGATCCG GCGAAGCGCG CGCATTTCAT CCATGCAGGC
GCAAAGGCGC TGGCGGAGGC CGAGGGCCTC GTGCTGGTCG AGGACGAGGC GCTGCTGCAT
GAAGTGGCGG GCCTTGTCGA ATGGCCCGTG CCGCTGATCG GCCGCATCGA CGACGAATTC
ATGTCCGTGC CGCAGGAAGT GCTGACCAGC ACCATGCGCG CGAACCAGAA ATATTTTGCG
CTCCACGACA AGACGGGGAA GCTCGCGCCG CGCTTCGTCG TGATCGCCAA CCTTGAAGCT
GAAGACGGCG GCAAGGCCAT CGTCAACGGC AACGAGCGCG TCCTCCGCGC CCGCTTCGCC
GACGCGCGCT TCCTGTGGGA TCAGGACCGG AAGCACACGC TGACGAGCCG TCTGCCGAAG
CTGCAGGAAG TCGTCTTCCA CGCCAAGCTC GGCACGGTGC ACGACAAGGC GATGCGCATC
GGCAAGCTCG CGCGCGAACT GGCGGCCTTC GTGCCCGGCG CGGACCCCGA CAAGGCGCAG
ATCGCGGGAG AACTCGCCAA GGCCGACCTC ACCACCGGCA TGGTCGGCGA GTTCCCCGAG
TTGCAGGGCC TCATGGGCGC GTACTACGCG CGGAACGATG GATTGGACGA CGAAATCGCG
GCTGCGATTG CCGAACATTA TGCGCCGCTG GGGCCGACCG ATGCTGTGCC TTTGACGCCG
CTTGGCAGGG TTGTTGCTCT CGCGGATAAG ATCGACACGC TGGTTGGATT CTGGGCGATT
GATGAAAAGC CCACCGGCTC CAAGGACCCT TACGCGCTTC GCCGCGCGGC TCTAGGGGTT
ATTCGCGTTG TCATGGAAGG TCAAATCAGA CTTTCACTTG TGCAAATCTT TGAGACTGCG
CAAAACGAAT TACGACTTTC AACAGAACAG GTAAGCGTTG AACTTCTGAA CAAGAGTGAT
GCTAAAGAAA GTGATACGCT GGGTCTTGAT TTGGGCGCGA AATCACTTGG ATATGCCTCT
GTCCACGAAA GAAGTGTCCG AGGTGCTAGT GTTCGAGTTA TTCGCTCTGG AAGGAGAGTT
TTTGGTGAAA GTATTGAATC TCAACTCCTC TCCTTCTTTG CCGACCGCCT GAAAATCTAT
CTTCGTGATC GTGGCGCGCG GCACGATCTG GTCGATGCCG TCTTCGCGCT CGAAGGTCAG
GACGATCTCG TCCTCATCGT GAAGCGCGTC GAGGCATTGT CGGAATTTCT TGCCACCGAA
GACGGCAAGA ACCTGCTCGC GGGCTACAAG CGCGCGACGA ATATTCTTCG CATCGAAGAG
AGGAAGGACG GCGAGGGCGC GTTCAATGCC GCGCCGGATG CCTCGCTCTT CGCGCAGGAC
GAAGAGAAGG CGCTGGGCGC CGCTATCGAG GCCGCGACGA AGGAAGCGAA AGCCGCCGTC
GCAAAGGAAG ACTTCGCCGC CGCCATGTCG GCGCTTGCGA AGCTCCGCGC GCCGGTCGAT
GCCTTCTTCG AGAAGGTGAC GGTGAATGCC GACGATGCGG CCCTCCGCGC GAACCGTTTG
AAGCTTCTGG CACAGATACG CGCGGCCTTG CACGAGGTCG CTGATTTTTC GAAGGTCGAG
GGCTAG
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| Protein sequence | MSELLLELFS EEIPARMQKR AGEDLVRLVT DALKAAGVEG KNARAFATPR RLALVIDGLP
DKTPDVKEER KGPKVGAPQQ AIDGFLRAAG LASIDEATVQ EDKKGAFYVA VTEKQGRDTA
ALIAEIVPAV IRAFPWPKSM RWGSGSLRWV RPLHSILCLL GGKVVNFEVD GIKSGNTTRG
HRFMAPDAFV VTDFADYEMK LLDAKVVLDP AKRAHFIHAG AKALAEAEGL VLVEDEALLH
EVAGLVEWPV PLIGRIDDEF MSVPQEVLTS TMRANQKYFA LHDKTGKLAP RFVVIANLEA
EDGGKAIVNG NERVLRARFA DARFLWDQDR KHTLTSRLPK LQEVVFHAKL GTVHDKAMRI
GKLARELAAF VPGADPDKAQ IAGELAKADL TTGMVGEFPE LQGLMGAYYA RNDGLDDEIA
AAIAEHYAPL GPTDAVPLTP LGRVVALADK IDTLVGFWAI DEKPTGSKDP YALRRAALGV
IRVVMEGQIR LSLVQIFETA QNELRLSTEQ VSVELLNKSD AKESDTLGLD LGAKSLGYAS
VHERSVRGAS VRVIRSGRRV FGESIESQLL SFFADRLKIY LRDRGARHDL VDAVFALEGQ
DDLVLIVKRV EALSEFLATE DGKNLLAGYK RATNILRIEE RKDGEGAFNA APDASLFAQD
EEKALGAAIE AATKEAKAAV AKEDFAAAMS ALAKLRAPVD AFFEKVTVNA DDAALRANRL
KLLAQIRAAL HEVADFSKVE G
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