Gene Plav_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0639 
Symbol 
ID5453935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp702842 
End bp703630 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID640876208 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001411919 
Protein GI154251095 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.108232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC ATGTACTCGT CACCGTCGAA GACGGCGTCC AGATCGTCAC GATGAACCGT 
CCTGACAAGA AGAACGCGCT GACGGCTGAA ATGTACAAGG TACTGGCCGA CGCCATCGAG
ACGGCGGATG CCGATCCGAA GATCCGCGTC ACGCTTTACA CCGGCTCCGG CGGCTCCTTC
ACGGCAGGCA ACGACCTTGG AGATTTCGCC AAGGCGGGTA CGACCCCGGT GGACGAGCAG
CCGAAGGAAA AGCCGCATGT GACGCGCTTT CTTGAAAACC TCGCCAATGC CCAAAAGCCC
ATCGTGGCGG CGGTGAACGG CCTTGCTGTC GGCGTCGGCG TCACCATGCT GCTTCACTGT
GACCTCGTTT ATGCGAGCGC CAGCGCAACC TTCCAGATGC CCTTCGTCAA TCTCGGCCTG
GTGCCCGAGG CCGGCTCGAC CTTCCTTCTG CAGCGCCAGA TCGGCATTCA GAAGGCGGCT
GATCTTTTCC TCACCGGCAA AAAGCTCGAT GCGCAAAAGG CGGAGGCTAT CGGGCTCGTG
GCGGACGTGT TCCCGGATAA TGCACTGCCC GGCGAGGCGC TCACCCGTGC CAAAGCCCTG
GCGGCAAAAG CGCCGAATGC GGTCCGCGCC ACAAAGGCGC TGCTGAAGGA TAATGACCGT
CCCCGCGTCG GCGAGGCGCG CGAAGCCGAA GCCCGCGTCT TCGGTGCCCA GCTGCGTTCA
GATGAAGTCA AAGAGGCCAT CAGCGCCTTT TTTGAAAAGC GGGCGCCGGA TTTCTCGAAG
TTCGGCTAG
 
Protein sequence
MTDHVLVTVE DGVQIVTMNR PDKKNALTAE MYKVLADAIE TADADPKIRV TLYTGSGGSF 
TAGNDLGDFA KAGTTPVDEQ PKEKPHVTRF LENLANAQKP IVAAVNGLAV GVGVTMLLHC
DLVYASASAT FQMPFVNLGL VPEAGSTFLL QRQIGIQKAA DLFLTGKKLD AQKAEAIGLV
ADVFPDNALP GEALTRAKAL AAKAPNAVRA TKALLKDNDR PRVGEAREAE ARVFGAQLRS
DEVKEAISAF FEKRAPDFSK FG