Gene Plav_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0601 
Symbol 
ID5456317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp664955 
End bp665701 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content63% 
IMG OID640876170 
Producthypothetical protein 
Protein accessionYP_001411881 
Protein GI154251057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.105908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.259663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTA CTCTCGCCTT CACAACGGCC ATTGTGGTTC TTGTGACGGC GACGCTTTCC 
GGCATTTTCG GAATGGCGGG TGGCATGATC CTGATGGGTT TTCTGACCGC CGCCTATTCG
GTCGGTGCCG CGATGATGCT GCATGGCGTG ACGCAGGCCG TGTCGAACGG CTACCGCGCC
ATCATCAACC GCAAGGACAT CGTCTGGCCG ATCGTCGCGA CCAACATGGC GGGCGGCGTC
GCCGCACTTG TTCTCTTCCT GCTGGTGAGC TTCGTCCCGG ACAAGGCGAC GGTCTTTCTC
GTTCTCGGCG CCATCCCCTT CGTCGCCTTC TCGATCCCGA AAAGCTGGGG CCTCGACGTG
ACGAAGCCCG CGGTGGCGAT TGGCGGTGGC TTCGTGGTGA CGGCGCTGAC GCTGACGGCG
GGCGTCGCCG GACCCATCCT CGACATCTTC TTCGTGCAGA GCCCGCTGAC GCGCCACCAG
ATCGTCGCGA CCAAGGCGGT GACGCAGACG CTGCAGCATC TGACGAAGCT GCTTTATTTC
GGCGTGCTCG CCGCGCATCT GCTGCCGGAT GCGGATATTC CCTGGTGGAT CTATGTGATG
GTGGCGCCGC TCGCCATGCT CGGCACGACC TTCGGCAAGA TGCTGCTCGA CCGCATGAAC
GACGGCCAGT TCAAGAACTG GAGCCGGTAC ATTCTCTACG TGCTGGGCGC CGTGTTGATC
GTGCGCGGTT TAATGCTGCT GGGCTGA
 
Protein sequence
MTATLAFTTA IVVLVTATLS GIFGMAGGMI LMGFLTAAYS VGAAMMLHGV TQAVSNGYRA 
IINRKDIVWP IVATNMAGGV AALVLFLLVS FVPDKATVFL VLGAIPFVAF SIPKSWGLDV
TKPAVAIGGG FVVTALTLTA GVAGPILDIF FVQSPLTRHQ IVATKAVTQT LQHLTKLLYF
GVLAAHLLPD ADIPWWIYVM VAPLAMLGTT FGKMLLDRMN DGQFKNWSRY ILYVLGAVLI
VRGLMLLG