| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0583 |
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| Symbol | |
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| ID | 5455615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 641524 |
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| End bp | 642396 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876152 |
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| Product | spermidine synthase |
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| Protein accession | YP_001411863 |
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| Protein GI | 154251039 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.923404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGG CCCCGAAAGG CCGCTGGATC GTGGAAACCC TCTATGAAAA AGAGGGTTTC
ACCTGCGCCT TCCGCGCCGA CAAGGTTTTC CACGAAGAGA ACACGGCCGA ACAGAATCTC
GTGATTTTCG AGAACGCGCT GTTCGGACGG ATGATGGCGC TCGACGGCAT CACGCAGGTA
ACGGAGCGCG ACGAGTTCAT CTATCACGAG ATGATGACCC ATGTGCCGAT CCTGGCGCAT
GGGCGCGTGC GCCGCGTGCT CATCATCGGC GGCGGCGACG GCGGCATCCT GCGCGAAGTG
CTCCGCCACA AGAAGGTCGA TAAGGTCACG ATGGTCGAAA TCGATCCGGC CGTGACCGAC
TTCTGCAAAA AGCAGCTCCC GAAAATTTCG GACGGTGCTT TCGACGATCC GCGTCTCGAT
CTCGTCTTCG CGGATGGTGC GAAATTCGTG GAGGAAACGA CCGAAAAATA CGATGTGATT
ATCGTGGATT CGACCGACCC GATCGGGCCG GGCGAAGTTT TGTTTCGCGA GAGCTTCTAT
CGCGCGGCGA GCGGCGTGCT GACGCCGGGC GGCGTGATCG TGACGCAGAA CGGCGTACCG
TTCATGCAAG GCAGCGAACT GAAAGCCACG ATGGAAAAAT TCCGCCGCCT CTTCAAAGAG
GCGACCTGCT ATCTGGCCAC CATCCCCACC TATGTCGGCG GACCGATGGC GATGGGATGG
GGCACGGATG ACGCGACACT GACCTCCCTG CCGCTTGAGG AAATCGAACG GCGGTTTGCG
GAGGAGGGTT TCGCGACCCG CTACTACACG CCTGAGGTTC ACAAGGCCGC CTTCGCCTTG
CCGCGCTACG TCCTCGATTG CGTGGCTCCC TGA
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| Protein sequence | MTEAPKGRWI VETLYEKEGF TCAFRADKVF HEENTAEQNL VIFENALFGR MMALDGITQV
TERDEFIYHE MMTHVPILAH GRVRRVLIIG GGDGGILREV LRHKKVDKVT MVEIDPAVTD
FCKKQLPKIS DGAFDDPRLD LVFADGAKFV EETTEKYDVI IVDSTDPIGP GEVLFRESFY
RAASGVLTPG GVIVTQNGVP FMQGSELKAT MEKFRRLFKE ATCYLATIPT YVGGPMAMGW
GTDDATLTSL PLEEIERRFA EEGFATRYYT PEVHKAAFAL PRYVLDCVAP
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