| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0553 |
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| Symbol | |
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| ID | 5455391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 603413 |
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| End bp | 605209 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876121 |
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| Product | ABC transporter related |
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| Protein accession | YP_001411833 |
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| Protein GI | 154251009 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTT CGATCTCACC CCGCCGCATC GCGGCATTTC TTTGGGACCA TTGGCGCCGC
CATCCGGTCC GCGGCTCCTT GCTGATCGGC CTCATGCTCG TGTCGGTTGC CTTCGACGTG
GCCTTCCCCA TCGTGTCCGG CCGGTTGGTC GATGCCGTTG CACAAGCGGA AACGCCACCT
GCGCCATCCG ATATCGACCT GGTGTTGTTG GCGCTTTGGC TCTTTGTCGG ACAGGCGCTG
GGCTTCCAGA CGTCGCGCCG GGCGGCCATG CTTGTCTGGG CGGGGTTTGC CTCCCGCGTC
ATGCGCGAGA TCGTGACGGA GGCGTTCCAT CGCGTGCAGC GTTACCCGAC GGATTGGCAT
TCAAACAGCT TTGCCGGTGC GACCGTCCGC AAGATCACAC GCGGCATGTG GGCTTACGAC
ACATTGGCCG ACACGATCTA TATCGGCTTC GTGCCTACGG GATGCGTGCT CGTCGGCATC
ACGATCAGCA TCGCAATTTA CTGGCCCTTG ATCGGTCTCT ATGTGCTCGT GGGGATCGTG
CTCTATCTTG CCGTTACCTA CGGGTTGGTG AAGAGGTTCG TCTCTCCACG CAACAAGCTG
AACGTGGCGG CGGACAGCGC CATGGGCGGC GCCATAGCGG ATGCCGTAAC TTGCAACCCG
GTGGTGAAAT CCTTCGGCGC GGAATCGCGG GAAGACGCGC GGCTTTTTCT GTTGACCGAT
GACTGGTCAA AGAAGGCCCG CCGCGCCTGG CGTTCGATGG ACCTCACCAT GCTCGCTCAA
GTGCTGGTTC TGCTGCTGCT GCAGATAGGC TTGCTCGGTC TGGTCATTCT CTTGTGGATG
CGGGGGGAGG CGACGCCCGG CGATGTCGCC TATGCGATGA CAAGCTATCT GCTGATCAGC
AGCTATCTGC GCGATATCGG CTTCCACCTT CAGAACCTGC AGCGCGGTGC CAACGAGCTT
GAAGATGTTG TTCGCTTCGC AGATATGCCG CCCGAGGAAA CCGCTGAAGA AGGCGCTCGA
CCCTTGAAAG TCAACGGCGG CTCGTTGCGG CTGGAGCGGG TCGGCTTTCG CTACCCGAAC
GGCGCCGAAC CGATTTACCG GAACCTCTCA CTGGACATTC CAGCCGGAGC CCGCATCGCG
CTCGTCGGAC AATCGGGCAG CGGAAAGTCG ACCTTCGTCA AGCTGCTGCA AAGGCTTTAT
AGCATCGATA GCGGCCGCAT CCTGATCGAC GGGCAGGACA TTGCGGGCGT GTCGCTGGAA
AGCCTGCGCC GCGCAATCGC CCTTGTCCCG CAGGAACCTG TCCTCTTCCA CCGGTCGATC
GCGGAGAACA TCGCCTATGC CAAGCCCGGC GCCACCCGCG AGGAGGTAGA ACAGGCTGCA
AGACTTGCTC ATGCGGATGA TTTCATCGGG GAGCTTTCCG AAGGTTACGA CACGCTTGTC
GGAGAACGCG GCGTGAAACT CTCCGGCGGT GAGCGTCAGA GGATCGCCAT TGCCAGGGCT
TTTCTGGCAG ACACGCCCAT CCTTGTTCTC GATGAAGCGA CATCGAGCCT CGACTCCGTC
ACGGAGGCCC ATATTCAGGA CGCGATGGAG CGGCTGATGG AAGGCCGGAC GACACTGGTG
ATTGCGCATC GTTTGTCGAC GATCCGCCGG ATGGACCGGA TTCTGGTTTT CCGGAAAGGT
GAAGTCGTGG AACAGGGCAC ACATGCCGAT CTGATGGCGC GCAAGGATGG TGTTTTCAGA
CATCTGCAGG CAGTTCAGCT CGCAGGTGCC CGCAATGTGC TTGGGGAAAC AGCCTGA
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| Protein sequence | MNISISPRRI AAFLWDHWRR HPVRGSLLIG LMLVSVAFDV AFPIVSGRLV DAVAQAETPP
APSDIDLVLL ALWLFVGQAL GFQTSRRAAM LVWAGFASRV MREIVTEAFH RVQRYPTDWH
SNSFAGATVR KITRGMWAYD TLADTIYIGF VPTGCVLVGI TISIAIYWPL IGLYVLVGIV
LYLAVTYGLV KRFVSPRNKL NVAADSAMGG AIADAVTCNP VVKSFGAESR EDARLFLLTD
DWSKKARRAW RSMDLTMLAQ VLVLLLLQIG LLGLVILLWM RGEATPGDVA YAMTSYLLIS
SYLRDIGFHL QNLQRGANEL EDVVRFADMP PEETAEEGAR PLKVNGGSLR LERVGFRYPN
GAEPIYRNLS LDIPAGARIA LVGQSGSGKS TFVKLLQRLY SIDSGRILID GQDIAGVSLE
SLRRAIALVP QEPVLFHRSI AENIAYAKPG ATREEVEQAA RLAHADDFIG ELSEGYDTLV
GERGVKLSGG ERQRIAIARA FLADTPILVL DEATSSLDSV TEAHIQDAME RLMEGRTTLV
IAHRLSTIRR MDRILVFRKG EVVEQGTHAD LMARKDGVFR HLQAVQLAGA RNVLGETA
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