Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0496 |
Symbol | |
ID | 5455519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 534801 |
End bp | 536003 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640876062 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001411776 |
Protein GI | 154250952 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.954912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTCG AACTCACGCC CGCCGATGCG AGCTTCCGCG ACGAAGTGCG CGCCTTTCTC GATGAAAACC TGACGCCGGA ACTGCGCGAG GCGGGGAGCC TCACGACGTC GGTCTTCACC GACAAGCAAT GGAATCTCGC CTGGCAGAAG ATCCTCTACA AGAAGGGCTG GGTGGCGCCG AGCTGGCCGA AGGAATATGG CGGAACCGGC TGGAGCGAGA TGCAGAAATA TATCTGGACC TCGGAATGCA CCCGCGCGGG CACGCCGGGC CTGTCGCCGA TGGGGCTTCG CATGTGCGGG CCGATGCTGA TGAAGTTCGG CACGCCCGAG CAGAAGAATT ACTACCTGCC GCGCATTCTT TCCGGCGAAG ACTATTGGTG CCAGGGCTAT TCGGAGCCGG GCGCGGGCTC GGACCTCGCC TCGCTGCAGC TGAAGGCGGT GCCGGATGGC GACGATTATG TGCTGAACGG GACCAAGATC TGGACCACGC ATGCCCACTT CGCGAACATG ATGTTCTGCC TCGTGCGCAC GGATGCAAGC GGCAAGCCGC AACAGGGCAT CACCTTCCTG CTGCTCGACA TGAATACACC CGGCATCAAG GTCGAGCCCA TCATCACGCT GGCGGGCGAA CATGAGGTGA ACCAGGTTTT CTTCGACGAT GTGCACGTGC CGAAGAAGAA CCGCGTCGGC GAAGAGAATG ACGGCTGGAC GGTCGCGAAA TATCTTCTCG AGTTCGAGCG CGGCGGCGCC TTCGCGGCGG CGCTTGAAGT GGGCATTGAG AAAATCCGGG AGGTCGCCGC AAGCGAACGC GACGGCGACG GCAAGCGCCT GATCGACGAT GCGACTTTCG CCCGCAAGAT CGCCGAAGCC GAGATCGAGG TGAAGGCGAT GGAGATGACC GAACATCGCG TGATGGCGGA GCTTGCCGGC GGCAAGAATC CCGGCCCCGC TTCCTCGATG CTGAAGACGC GCGGGACGGA AATGCGCCAG CGTCTCGACG AAATCGCCGT CGAGACCATC GGCTTCTATT CAGGCGTCGA CCAGCACGAT GCGCGGACGC CGGGATCGAA TGTCGAGCCG ATCGGCCCCG CGGAAGGCAT GGTCTTCATG CCGACCTATC TGAACAACCG GGCGGCTTCC ATCTATGGCG GCTCGAACGA AGTTCAGCGC GGCATCATGG CGAAGCTGGT GCTGGGGCTT TAA
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Protein sequence | MNLELTPADA SFRDEVRAFL DENLTPELRE AGSLTTSVFT DKQWNLAWQK ILYKKGWVAP SWPKEYGGTG WSEMQKYIWT SECTRAGTPG LSPMGLRMCG PMLMKFGTPE QKNYYLPRIL SGEDYWCQGY SEPGAGSDLA SLQLKAVPDG DDYVLNGTKI WTTHAHFANM MFCLVRTDAS GKPQQGITFL LLDMNTPGIK VEPIITLAGE HEVNQVFFDD VHVPKKNRVG EENDGWTVAK YLLEFERGGA FAAALEVGIE KIREVAASER DGDGKRLIDD ATFARKIAEA EIEVKAMEMT EHRVMAELAG GKNPGPASSM LKTRGTEMRQ RLDEIAVETI GFYSGVDQHD ARTPGSNVEP IGPAEGMVFM PTYLNNRAAS IYGGSNEVQR GIMAKLVLGL
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