Gene Plav_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0474 
Symbol 
ID5456818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp515428 
End bp516306 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content66% 
IMG OID640876040 
Productenoyl-CoA hydratase 
Protein accessionYP_001411754 
Protein GI154250930 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCG AACACATCCT CTATGAGCGC CAGGGCCGCA TCGCCACCAT CACGCTGAAC 
CGCCCGGACA GGCTGAATGC CATCGCCTCG GGCATGCCGC GCGAGATCGC GCAGGCCGTC
GACATGGCAG CCGAAGATGA CGGCGTCCAT GTCATCGTCC TCACAGGCGC CGGCCGCGCC
TTCTGCGCCG GCTATGATCT GAAGGATTTC GCCGAGGCGC CGCGCGGCAA TCGGGGCACC
GGCACGCCGG AAGGCGACCC CCGCCCCTGG GACCCCATGG TCGACTTCAA CATGATGCAT
GCCAACACGC GCGACTTCAT GTCCCTCTGG CGCTGCCACA AGCCAACCAT TGCCAAGGTC
CGCGGCTTCG CCGTCGCCGG CGGCTCCGAC ATCGCGCTCT GTTGCGACAT GGTGGTGATG
GCGGACGACG CGAAGATCGG CTACCCGCCC GCCCGCGTCT GGGGCTGCCC GACAACCGCC
ATGTGGGTCT ACCGCCTCGG GCCGGAGCGC GCCAAGCGCA TGCTCTTCAC CGGCGATCTC
GTGAGCGGAA AGGAAGCGGC AGACATGGGC CTCGTCCTCG AAGCCGTACC CGACGATGCG
CTCGATGCCC GCGTCGATGA ACTCGCAAAC CGCATGGCCG GCATCCCCCG CAACCAGCTC
ATGATGCAGA AGCTCCTCGT CAATCAGGCC TATGAAAACA TGGGGCTCAA CACGACGCAG
ATGTTCGCGA CCCTTTTCGA CGGCATCACC CGCCACTCGC CCGAAGGCGT CTGGTTCAAG
GAGCGCGCGG AACGCGTCGG CTTCCAGCAG GCGGTGAAGG AGCGCGACGG CGGTGCCCCC
ATCGCCGAAG GCATCTCCCG CTCAACCTAC AAATTCTGA
 
Protein sequence
MPFEHILYER QGRIATITLN RPDRLNAIAS GMPREIAQAV DMAAEDDGVH VIVLTGAGRA 
FCAGYDLKDF AEAPRGNRGT GTPEGDPRPW DPMVDFNMMH ANTRDFMSLW RCHKPTIAKV
RGFAVAGGSD IALCCDMVVM ADDAKIGYPP ARVWGCPTTA MWVYRLGPER AKRMLFTGDL
VSGKEAADMG LVLEAVPDDA LDARVDELAN RMAGIPRNQL MMQKLLVNQA YENMGLNTTQ
MFATLFDGIT RHSPEGVWFK ERAERVGFQQ AVKERDGGAP IAEGISRSTY KF