| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0434 |
|---|
| Symbol | |
|---|
| ID | 5453893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 471008 |
|---|
| End bp | 471832 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640876000 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001411714 |
|---|
| Protein GI | 154250890 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCC TCCGCGCCCT TCTCTTGTTC GCGGCAGTGC TCGCCGCCGC TCCCGCGCTC
GCCTTCGATC GCGGCCTTGC CGAGGCACAG GCGGCCTTTG ACAGCGGCGC CTTCGCCCGC
GCCGCCATGC TCGCCCGCAG GCTGCAGACC GGCGAGGGCG ACGCGCTCGC CTCGCGGGCG
GAAATGGTGC GGGGTGATTT CGGCGCCGAG GGCGATGCGC GCCTCGTCCG TTTCGAGGCG
GCATTGCGCG ATGGCCGCCG TGCCGTCGCG CGCGCGCCCG AAAGGCCCGA GACGCATCTC
GCGGTCGCCG TCGCGCTCGG CCTCGTCGCC CGCCGCGAAG GCAGCATGGC CGCGCATTTC
ACGGGCATGG CCACGGAAGC CCGCGCCCAT ATCGACAAGG CGCTTGCCCT CAACCCGGAC
AATGCCTGGG CCCATGCCGC GCTTGGCGGC TGGCATCTCG AAATCGTCCA TGCCGGCGGG
CCCCTTGGCG GCGTCGTCTA TGGCGCATCC GCTGATGAAG GCATCGCCGC CTATGAGCGT
GCCCTCGCGC TTGATCCCGC CAATATGTCG ATTGCCTGGC AATATGCCTT CCAGCTCGCG
GGCTTCGGCA CCACCGCCAA AACCGCCCGC GCCGGGGAAC TGCTCGCGGA AATCGCCGGG
CGCGAGCCGG CTACGGCGCT GGAAAAGCTG CTGCGTGATG CGGCGCTGGA ATTGAAACAG
GCGCTCGACG CGAACGACAT GGCCGCCGCC TCCCGCATCG TCGCCCTGCG GCTTGGCCGC
GCGGCACCGC CCGCACAGGC GCCGGCCCCA ACAGGCAAGA GATGA
|
|---|
| Protein sequence | MIALRALLLF AAVLAAAPAL AFDRGLAEAQ AAFDSGAFAR AAMLARRLQT GEGDALASRA
EMVRGDFGAE GDARLVRFEA ALRDGRRAVA RAPERPETHL AVAVALGLVA RREGSMAAHF
TGMATEARAH IDKALALNPD NAWAHAALGG WHLEIVHAGG PLGGVVYGAS ADEGIAAYER
ALALDPANMS IAWQYAFQLA GFGTTAKTAR AGELLAEIAG REPATALEKL LRDAALELKQ
ALDANDMAAA SRIVALRLGR AAPPAQAPAP TGKR
|
|---|
| |