Gene Plav_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0379 
Symbol 
ID5454344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp404728 
End bp405246 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content63% 
IMG OID640875944 
Producthypothetical protein 
Protein accessionYP_001411659 
Protein GI154250835 
COG category[S] Function unknown 
COG ID[COG5388] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATTG GTCGAGCTGC AGCGCGGCAC AAGAGCATTG TGTTGCCCCC CATCGATCTC 
GACGTAACGC TGGCCTGCGA GGCACCCGAG GTTCAGGCGG GGCTTGCCTA CTGGCGCGAG
AAAGCAGCCG GACGGCCGAT GCCGCTGCGT TCCGACGTCA AGCCGGAGGA AATAGCCCGC
CTCCTTCCCC ATCTCTGCCT TTTCGAGCTC CGTAAAACGC CGGCCGGCGT CGAACTTTTC
CCCCGCCTCG CCGGGGCGAA ATTCGAGGAA GTCTTCGGCC CGATCCACAA CAAGCCCCTC
GCCACGGTCC TCGCCCCGGA AATACTGGAA CGCTGGCGCG GCGGCGCCGC CGCCGTCGTC
GAGCTCGCCG CGCCGCTCCG GCTCACCGGT AACGTGCTGC ACCAGGACAA GACCTTCATC
CGCTTTGAAA TCATCATGGC GCCCTTGAGC CATGATGGCA GCGAGATCGA CATGTTCTTT
CTCGTCTCGC ATTTCGAGAT GGAAGAGCTC TCGTTCTAG
 
Protein sequence
MSIGRAAARH KSIVLPPIDL DVTLACEAPE VQAGLAYWRE KAAGRPMPLR SDVKPEEIAR 
LLPHLCLFEL RKTPAGVELF PRLAGAKFEE VFGPIHNKPL ATVLAPEILE RWRGGAAAVV
ELAAPLRLTG NVLHQDKTFI RFEIIMAPLS HDGSEIDMFF LVSHFEMEEL SF