Gene Plav_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0339 
Symbol 
ID5455746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp361056 
End bp361364 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content48% 
IMG OID640875904 
ProductXRE family transcriptional regulator 
Protein accessionYP_001411619 
Protein GI154250795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAG GCAACGGGAA ATCCTTGATT GAAGCGGTGC GGGCACGCAA GCGTGAGTTG 
GGTATCTCCC AGCTCTCGCT TGCCAAACGT CTTGGTGTAA GCCAAGGGCA TCTCTCGAAG
GTGTTGTCAA AAAAAGCCCT AGTTTCCGAC AAAATTAATG GAAGAATGCT CAAGTTTCTC
GAGAGGATTG AAGAGGGAGA GCATGTGACC ACGGATCAAT TGGAGCAGGA AATCCTTTCC
GCGCTTAGGG AGTCTCCAAC CTTCCGGACG CTGGTAATAA GTGCATTAGA AATGCATAAA
AAAGCATAG
 
Protein sequence
MQEGNGKSLI EAVRARKREL GISQLSLAKR LGVSQGHLSK VLSKKALVSD KINGRMLKFL 
ERIEEGEHVT TDQLEQEILS ALRESPTFRT LVISALEMHK KA