Gene Plav_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0329 
Symbol 
ID5455865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp354044 
End bp354661 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content51% 
IMG OID640875894 
Productphosphoribosyltransferase-like protein 
Protein accessionYP_001411609 
Protein GI154250785 
COG category[R] General function prediction only 
COG ID[COG2236] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGG CGATCGCACA AACCGCAGCT TTCCTCGTGG GTATTGCTTC TAGCGTTGTA 
GCTGCACTCC TCTTTACCGC AATCTCGACG AAGTACAATG CACGCTTCAG TTTCCGGCGC
ATCGTGGCTT TGGTACTCGA ACTAGCGGAA CAACTCCAGA ATGACGGCTT CACTCCCGAC
TTCATCGTTG CGATTGACCG AAATTCGACA ATAACCGGCG GAATATTGGC TGGAAATCTC
GGTCTTAAAA CAGTGATAAG TGTGGCAACA ATCAGCTGTA GGCGGAATGA CGGTTCGCGA
GAAACCATTG TTGCTCAAGG CTATACCTTG GACGCTGACG CCCTTTCGGG AAAGAAAGTG
CTAGTTTATA TATGCTTTAA CGACTCCGGG ACATCGCTCG ATACGGTTGC ACGTCAGGTA
ATGTCGACGG AGAAAAGTCC CTCCGATGTC AGAACAGCTG CTCTCTTTAC GACTTCGTCA
CCTCGCTTTA TGCCGAAGTA TTTTGCGAGA AAAGTAGGGA CGGACCTTCG AATCCCAATT
CATCTCATCA TGCAGAGAAT GCCTTGGGTC ACTCCAACGT GGAAACACGT GCTGGGGAGC
GAACGACTAC GCCGGTAG
 
Protein sequence
MPEAIAQTAA FLVGIASSVV AALLFTAIST KYNARFSFRR IVALVLELAE QLQNDGFTPD 
FIVAIDRNST ITGGILAGNL GLKTVISVAT ISCRRNDGSR ETIVAQGYTL DADALSGKKV
LVYICFNDSG TSLDTVARQV MSTEKSPSDV RTAALFTTSS PRFMPKYFAR KVGTDLRIPI
HLIMQRMPWV TPTWKHVLGS ERLRR