Gene Plav_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0257 
Symbol 
ID5455359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp278970 
End bp279917 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content49% 
IMG OID640875821 
Producthypothetical protein 
Protein accessionYP_001411537 
Protein GI154250713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGTA ACGATCTCTT CGACTTCATG CGACAGGAGA CAAACTCTCT TGCGCAAGAG 
TATCACCGAA TACGTGCGCG CACTGTTGAA GACCCAGGCA CGGCTGGTGA CCAAGGCGAA
GAGAACTGGA GAGAAATACT CGACAAATGG CTTTCTCCCA CTCATCAAGT CGTTACAAGG
GGCCGGATTC TCGGACCAGA TGGATCGGCC AGCCCGCAAG TGGATGTGCT AGTTCTGAGC
CCCAATTATC CGAAAGCTCT GATCGGCAAG AAATTATATC TTGCTGGAGG TGTAGTAGCT
GCGTTCGAGT GCAAGAACAC TTTGAAAGCA ACCCACATCG CTGAGGCAAT GGAAACTTCA
GTTAAGATAA GATCGCTTTT GTCGGCGAGA TATGGTTCCC CCTATAAAGA AATATTCAGT
CCTATTGTTT TTGGCGTCTT GGCGCACTCA CACTCTTGGT CGAAAAAAAC CGTCGAAGAA
ACTGTTTCAC AAAGGCTTTT TGATGATGAT GTGAAATTCG TCACTCATCC TCGTGGGACG
CTTGACGTGA TTTGTGTAGC TGACACAGCC ACGTGGGCAT GCCTGAAAGT ACCGTTGATC
GGGCCGGGGC AGCTTAGGCC TTATGACGAA AACAGTAAGA AACTCTACGG AGAAGAAGGC
TCTGTTGTCA CAACCTATTC GAAATTCGTT GTCGACGACG GTACACGCAG CGAAGTTTTC
ACCCCGATTG GCGCGCTGTT GCAGGTGCTG TATCGTCGAA TGGCGTGGGA AGATATCAGC
ATGAGGCCGC TTGCTGATTA CTTCCAAGAT GTAAACAAGA AAGCCGCAAG TGGTGGCTCA
AGCCGATTGT GGCCGCCGTA TATATATTCT CAAAACGTTA GAGACAAACT TCGAGATGGA
GGACTGACCT CAGAAGAGTG GAGTGAGTGG TCAAACATAT TTCGATGA
 
Protein sequence
MASNDLFDFM RQETNSLAQE YHRIRARTVE DPGTAGDQGE ENWREILDKW LSPTHQVVTR 
GRILGPDGSA SPQVDVLVLS PNYPKALIGK KLYLAGGVVA AFECKNTLKA THIAEAMETS
VKIRSLLSAR YGSPYKEIFS PIVFGVLAHS HSWSKKTVEE TVSQRLFDDD VKFVTHPRGT
LDVICVADTA TWACLKVPLI GPGQLRPYDE NSKKLYGEEG SVVTTYSKFV VDDGTRSEVF
TPIGALLQVL YRRMAWEDIS MRPLADYFQD VNKKAASGGS SRLWPPYIYS QNVRDKLRDG
GLTSEEWSEW SNIFR