| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0254 |
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| Symbol | |
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| ID | 5454007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 275537 |
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| End bp | 276496 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875817 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001411534 |
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| Protein GI | 154250710 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGC CCGAAAATCC CAATATTTTC GCCAACAATC CTCTCGATCG CGCCAGCTAC
CGCCGTACCG ACCAGGCATG GCTCTCGGAG CAGCTCGCGG CGCCGACAAG CCTTTTCGTG
CCGTTCCGGC GTCAGCCGAA GCGCGATTGG GAGCCTTTCG TTCTGCCGGA GGCCGCTCCA
TCGCAAGGCA AGGATATCGG CTGGCTGCCG GGTTCCCTGA TGCCGCAGCT TGCGGGCGAG
GGCATCGTGG TCTTTCTCGG CATCAACAAG CGCGGCAAGG CGCTTTTCGC GGCGGATGTG
AGCGCGCTCA AGGATGCGGA GAATCACCCG GCGCTGAAAG GCCTCGGCTC GTTTGAGGAT
TTGCGCGGCC TCGCCATGGC CGGCGAGATC ACGCCGACAG AGCTCGCGAT CATGGCGCAG
GCGAAGTCGA TGATCGACTG GCACAGCCGC CACGGCTTCT GCTCGGTCTG CGGCACGAAA
AGCGAAATGG CGGAAGCCGG TTACAAGCGG CAATGCCCGT CCTGCAAGGC CGAACATTTT
CCGCGCACCG ATCCCGTGGT CATCATGCTC GCGACCTTTG AAGACAAATG CTTTCTCGGG
CGCCAGAAGA TCTGGCCGAA GGGGATGCAT TCGGCGCTGG CCGGATTTGT CGAGCCGGGC
GAATCGATCG AGGAAGCCGT CGCGCGCGAG CTTCACGAGG AAGCGGGTCT CAGCGTCGGC
GCCGTCACCT ATCACTCGAC CCAGCCCTGG CCTTATCCCT CATCCCTGAT GATCGGCTGC
CACGCCATTG CCGATTCGGA AGATTTCACC ATCGACGGCA TCGAGCTTTC GGAAGGACGC
TGGTTCACAC GGGCCGAAGC GCAGGCGATC CTCGCCGGCA AGGGCGACGG CACGGCGTGG
TTCCCCCCGC CCTTCGCCAT CGCGCATCAG CTCATCAAGG CGTTTGCCGA AGGAAAATAG
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| Protein sequence | MPLPENPNIF ANNPLDRASY RRTDQAWLSE QLAAPTSLFV PFRRQPKRDW EPFVLPEAAP
SQGKDIGWLP GSLMPQLAGE GIVVFLGINK RGKALFAADV SALKDAENHP ALKGLGSFED
LRGLAMAGEI TPTELAIMAQ AKSMIDWHSR HGFCSVCGTK SEMAEAGYKR QCPSCKAEHF
PRTDPVVIML ATFEDKCFLG RQKIWPKGMH SALAGFVEPG ESIEEAVARE LHEEAGLSVG
AVTYHSTQPW PYPSSLMIGC HAIADSEDFT IDGIELSEGR WFTRAEAQAI LAGKGDGTAW
FPPPFAIAHQ LIKAFAEGK
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