| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0238 |
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| Symbol | |
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| ID | 5454459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 257341 |
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| End bp | 258309 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640875801 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001411518 |
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| Protein GI | 154250694 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCAAA TCGCCGCGAG CATGTTCAGT ATCGAAAACG TGGTGACGTT GCTCACGGCG
GTAGCGGCGT TTGCGACGAT CTTTACGTTG ACGGCACCGC TCCTGAACAC AGACAAGCTC
TCCACCCGCA TGAAGTATGT TTCTACCGAG CGAGAGGCAA TGCGCGCGCG TGCGCGCGAG
GCTCTCGCCC AGGAAAAGAC CCGTCTGCGC CATACGCCGA AAGGGTTCAT AAAACAGGTG
GTCGAGAAGT TTGCGAGCGG CAACATGCTT GAAAATGCTG CTGTGAAGGA GAAACTTCGT
CAGGCAGGCT TTCGCGGCCC GGGACCGATG TATACGTTCG TCTTTTTCCG CTTTGTCATG
CCGCCAGTGC TTTTCGTGGT GACGCTGCTT TATATGGTGT TTGTCAACGA TTTCGGTCTG
CAGCCTATGG CGCGTCTTGC CGTCTCGTGT GCCGCGGCTT TTGTCGGCTT CTATTTACCC
AACCTTTTTG TCGAGAACGT CATTTCGCGC CGGCAGGATT CGATTCGAAA GGCATTTCCG
GATGCTCTCG ATCTTATGTT GATCTGCGTG GAGTCGGGAA TGTCTATCGA AGCGGCCTTC
CAGAAAGTTG CGGCCGAGAT AGGTGCCCAG TCGGTCGAGC TTGCCGAGGA GTTGGGGCTG
ACGACGGCGG AGCTTTCCTA CCTTCAGGAG CGCCGCATGG CATATGAGAA CCTAGCCAGA
CGCACTGGCC TGCCGGGGGT GAAGGCGGTG GCGACGACGC TGATACAGGC GGAGCGTTAC
GGTACGCCGC TTGGACAGGC GTTGCGCGTC ATGGCACAGG AGAACCGCGA CATGCGGATG
GCGGAAGCAG AAAAAAAGGC GGCCGGTCTG CCGCCGAAGC TGACGGTGCC GATGATCCTG
TTCTTCCTTC CGGTGCTCTT CGGCGTCATC CTAGGGCCCG CCATCATTAA GTCCTTCGCC
AACGTCTGA
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| Protein sequence | MFQIAASMFS IENVVTLLTA VAAFATIFTL TAPLLNTDKL STRMKYVSTE REAMRARARE
ALAQEKTRLR HTPKGFIKQV VEKFASGNML ENAAVKEKLR QAGFRGPGPM YTFVFFRFVM
PPVLFVVTLL YMVFVNDFGL QPMARLAVSC AAAFVGFYLP NLFVENVISR RQDSIRKAFP
DALDLMLICV ESGMSIEAAF QKVAAEIGAQ SVELAEELGL TTAELSYLQE RRMAYENLAR
RTGLPGVKAV ATTLIQAERY GTPLGQALRV MAQENRDMRM AEAEKKAAGL PPKLTVPMIL
FFLPVLFGVI LGPAIIKSFA NV
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