Gene Plav_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0157 
Symbol 
ID5454584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp172668 
End bp173081 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content64% 
IMG OID640875718 
Productdehydratase 
Protein accessionYP_001411437 
Protein GI154250613 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCG CAACCGCCGC CCCCGGCACG GAGATCGGCA GCCTGACCGC CGATCCCGTC 
ACCCGCCACA TGCTCGCGCT TTATTGCGGT GCTTCCAGCG ACCATAACCC GATCCATGTC
GACATCGATT TCGCGAAGGC CGCCGGCATG CCGGATGTCT TCGCGCACGG CATGCTCTCG
ATGGCCTTCC TCGGAAGGCT CCTCACGAAG CTCGCGCCCC AAACCTCGCT TCGCAGCTTC
GGCGCGCGCT TCACCTCGAT CACGCCGCTT GGCGCCGAAA TTTCCTGCAC CGCGAAGCTC
GTCGAGCGCT TCGAGGAAGC GGGCGAGAAG CGCGCGAAGC TCGAACTCGT CGCCATGGAC
AGAAAAAGCA ACGACGTGAA GCTCATGGGC GAAGCCGTCG TCGCGCTCCG GTAG
 
Protein sequence
MDIATAAPGT EIGSLTADPV TRHMLALYCG ASSDHNPIHV DIDFAKAAGM PDVFAHGMLS 
MAFLGRLLTK LAPQTSLRSF GARFTSITPL GAEISCTAKL VERFEEAGEK RAKLELVAMD
RKSNDVKLMG EAVVALR