Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0148 |
Symbol | |
ID | 5454902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 162854 |
End bp | 163798 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640875708 |
Product | signal peptide peptidase SppA, 36K type |
Protein accession | YP_001411428 |
Protein GI | 154250604 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCACTCG ACGCGGACGC AATCACGGAC AGGCGACGTC TCAAGCGTCG CCTCTTTTTT TGGCGCGCCG GCGCGATCGT CGCGGTCGCC CTCGCCCTTC TGGTGCTCGC GGCCGAAAGC GGCATCTACC TCCCGCGCGC CCATATCGCT CGTGTGACCA TCGACGGCGT GATCGTGCAT GATCGCTACC AGAACGAGAT GTTCAAGAAA CTCGCCGAGG ATTCCAGCGT ACGGGGGGTC ATTCTGTCCA TCGACAGTCC GGGGGGCACG ACCACGGGCG CGGAAGCTCT CTACGAAGCC GTTCGAGAGC TGGCTGAAAA AAAGCCGGTT GTGGCTGTGC TGGGCACTGT GGCCGCGTCG GGGGGTTATA TTGCCGCCCT CTCCGCCGAT CACATCGTAT CGAGGGGCAA TACGATTACC GGCTCTATCG GTGTCGTCTT TCAGTGGGCG CAGCTCGAGA AGTTGCTTGG CAATATCGGG GTGGAAGTAC GAGAGGTGAA ATCCTCACCG CTCAAGGCTG AGCCGAGCCC CTTCCATACA ACGAACCCCG AAGCACTGAA GGTGACCCGG GAGCTGATCG ACAGTTCGTA TGACTGGTTT CTGCGTCTCG TCACAATACG GCGCGGGCTG GACGAAGCAA CGGCGCGGAT GGTAGGCGAC GGGCGGGTCT ATACCGGTTG GCAGGCGGTC GAGAACGGCC TGGTAGACGA ATTAGGCGGA GAGGACGAAG CAATCGCCTG GCTCGCGAAG GAACACAAGA TCGACGCCAG CCTGCCGGTG AGAGACCGCA CGCCCGCTTA TCCCGATCTC GGTATGGCGA GTTTCACCGG GAAGGCACTG GGTGAAGCGG CGGTCACGGC GATAGACGGT CTGACCGGAA AAACACAACA GACAAAAAGA CTTACACTTG ACGGTCTGAC CAGCGTTTGG CAACCTGACC GCTAA
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Protein sequence | MPLDADAITD RRRLKRRLFF WRAGAIVAVA LALLVLAAES GIYLPRAHIA RVTIDGVIVH DRYQNEMFKK LAEDSSVRGV ILSIDSPGGT TTGAEALYEA VRELAEKKPV VAVLGTVAAS GGYIAALSAD HIVSRGNTIT GSIGVVFQWA QLEKLLGNIG VEVREVKSSP LKAEPSPFHT TNPEALKVTR ELIDSSYDWF LRLVTIRRGL DEATARMVGD GRVYTGWQAV ENGLVDELGG EDEAIAWLAK EHKIDASLPV RDRTPAYPDL GMASFTGKAL GEAAVTAIDG LTGKTQQTKR LTLDGLTSVW QPDR
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