| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0115 |
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| Symbol | |
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| ID | 5456353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 127257 |
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| End bp | 127562 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640875675 |
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| Product | phosphotransferase system, phosphocarrier protein HPr |
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| Protein accession | YP_001411395 |
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| Protein GI | 154250571 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.158465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCCTCTG CCGAAGCGAG GCCCGCCGCG CCCGGCGCCC ATGTTCGCGA ACTCGAAATC
GTCAATAATC GCGGCCTTCA TGCCCGTGCC TCGGCAAAGT TCGTGCAGCT CGCCGAAACC
TTCGATGCCG AAATCCGCGT CTCCCGCGAA GGGCAGACCG TTCCCGGCAC TTCGATCATG
GGCCTGATGA TGCTCGCCGC CGCGCCCGGC TGCTGCATCC GCGTCGAAAC CTCGGGCCCC
GAAGCGGAAG CCGCGCTTGA AGCCCTGGCC GCCCTTGTCG CGGACGGCTT CGGCGAACGC
GACTGA
|
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| Protein sequence | MSSAEARPAA PGAHVRELEI VNNRGLHARA SAKFVQLAET FDAEIRVSRE GQTVPGTSIM
GLMMLAAAPG CCIRVETSGP EAEAALEALA ALVADGFGER D
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