Gene Plav_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0115 
Symbol 
ID5456353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp127257 
End bp127562 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content67% 
IMG OID640875675 
Productphosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_001411395 
Protein GI154250571 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.158465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTCTG CCGAAGCGAG GCCCGCCGCG CCCGGCGCCC ATGTTCGCGA ACTCGAAATC 
GTCAATAATC GCGGCCTTCA TGCCCGTGCC TCGGCAAAGT TCGTGCAGCT CGCCGAAACC
TTCGATGCCG AAATCCGCGT CTCCCGCGAA GGGCAGACCG TTCCCGGCAC TTCGATCATG
GGCCTGATGA TGCTCGCCGC CGCGCCCGGC TGCTGCATCC GCGTCGAAAC CTCGGGCCCC
GAAGCGGAAG CCGCGCTTGA AGCCCTGGCC GCCCTTGTCG CGGACGGCTT CGGCGAACGC
GACTGA
 
Protein sequence
MSSAEARPAA PGAHVRELEI VNNRGLHARA SAKFVQLAET FDAEIRVSRE GQTVPGTSIM 
GLMMLAAAPG CCIRVETSGP EAEAALEALA ALVADGFGER D