| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_2015 |
|---|
| Symbol | |
|---|
| ID | 4618345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1825805 |
|---|
| End bp | 1826398 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639785106 |
|---|
| Product | peptidase S26B, signal peptidase |
|---|
| Protein accession | YP_931505 |
|---|
| Protein GI | 119873498 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02228] signal peptidase I, archaeal type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000493548 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGCGGC TTTTGGAGTT ATTGTTATAT ACTGGCTGTG TCTTTGGTGG TATGGGGGGT
TGGGTTAGGG AGTTTTTGTG GCTTGTCGCT ATTGTGGTGG CTTTGGTGGT GTATTCTGTG
GTGGCTGGCG TGGCGTGGCC TATTGCGGTT GTTTCTTCCT ACTCTATGGA ACCGACGTTG
AGAGTGGGGG ACTTCATCTT TCTGGTGGGT GCCAGCTGTC AGAGCGTTTC TCCGGGGGAT
GTTGTGGTCT ACGTGGCTAG GAACCCCCTG TGGGTGGGGA GTTGGATTAT CCACAGGGTG
TATCAAAAGG TTGACCGTGG TGGCTGTGGC TTGATCACGT GGGGTGACAA CAACCCGGCG
CCTGACCAGG CGGCGGGGGA GCCCCCAGTT ACAAATAACA TAATTGGGAA GGTTCTCTTC
ACAGTGCCGT ATGTGGGGGT GTTTCCGCTG GTGGTTAGGC CTCAGGGGGT GGGGGGCGAG
GCCGTGGCGG CTTGGTTGGG GAGGCTGGCT CTCTTCTCTG TGGCGACTTA CCTCTTCTAC
TTGTATTTCA AGGGGGGCGA GCCTAGGCGT AGGAGGGGGA GGAAAGCTAT ATAA
|
|---|
| Protein sequence | MLRLLELLLY TGCVFGGMGG WVREFLWLVA IVVALVVYSV VAGVAWPIAV VSSYSMEPTL
RVGDFIFLVG ASCQSVSPGD VVVYVARNPL WVGSWIIHRV YQKVDRGGCG LITWGDNNPA
PDQAAGEPPV TNNIIGKVLF TVPYVGVFPL VVRPQGVGGE AVAAWLGRLA LFSVATYLFY
LYFKGGEPRR RRGRKAI
|
|---|
| |