Gene Pisl_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_2005 
Symbol 
ID4617481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1820102 
End bp1820446 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content55% 
IMG OID639785096 
Producthypothetical protein 
Protein accessionYP_931495 
Protein GI119873488 
COG category[R] General function prediction only 
COG ID[COG1342] Predicted DNA-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.456089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAGC GCCACCGGAG GCGCCACAGA CACAGCTGGG GGCTGGCTGG GGCGAGGACA 
GAGATTACAA CAACCCTCCC TTTTGAAGAG CTATTATATA TACCCATAAA GGAGGCCGCC
GGCCTCCACC CCACGCACTA CATAGAGCTC TGTAGCTACG AGATAGAGGC GATGTATTTA
ATACATGTGG CAGGTCTTAC AACAGAGGAG GCAGCCGAGA GAGTGGGGGT CTCCAAGGCG
ACTTTTTGGA GAATTCTTGA ACAAGCTCGC CACAAAGTGG CGAGAGCCCT CGCCGAGAGG
CTCCCCCTGA AACTAGTTTC ATGTAAAAAA GAGGGGCCAC CATAG
 
Protein sequence
MGQRHRRRHR HSWGLAGART EITTTLPFEE LLYIPIKEAA GLHPTHYIEL CSYEIEAMYL 
IHVAGLTTEE AAERVGVSKA TFWRILEQAR HKVARALAER LPLKLVSCKK EGPP