Gene Pisl_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1996 
Symbol 
ID4617590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1813419 
End bp1814126 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content54% 
IMG OID639785087 
Productformate dehydrogenase, cytochrome b556 subunit (formate dehydrogenase gamma subunit) 
Protein accessionYP_931486 
Protein GI119873479 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0143456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAG TGGAGGTTGT AAGTATTGGG TATAGGGTTG CCCACCAGTG GAATTTGTTG 
TTGTTTACTG TGTTGGCGAT TACTGGCGGC GCTCTATTTG CCATAGAGGT TTTGGCCCCT
CTGGTGTACG CGGTGGGCGC CCCCCTGGCG GCGGCGGTGG GCACAGACGC CGTTACAGCC
GGCGTGCAGT TGTTTAGAAT TGCCCACAGA TTTCTAGGGC ATATATGGGG GGCGTTGCTC
TTGGTGTACG CCGTCAATCT ACTCCTCTTT AAGAAGGTGA GGATTTTTGA CGCCTTCCGC
AAGCCGCTTG GCCAACAGAT TAGGGAAGCT AAGGCGTTGG CTGGGCACTA CCTCTTCGGC
AGGCCGCTTC CCGAGGACGT CAAGACGTCT ATGGAGAGAC ACAACGTGTT TGTTGCCTAC
ATGGCGCTTG TGCTTATCGC GTCGGTAGTA CTCCTCTCTA TTAGCGGCGT GGCGCTTGTC
TATAGAGACG CCCTAGGCCT ATCTCTAGCG GAGGCGAGAC TTATGCTGTT GCTACACGAC
GTCGGCTTCG CCCTAGGGCT ACTCTTCGTA GCGCTTCACA TATTCGCCGT ACTACACCCC
ACAAACAGAC CACTACTCAA CGCCATGTTC AACGACGGAA CCATCCCACT AGACTGGGCA
AAAACACACA TGCCAAACTA CTTAAGAAGA CGTGGAATCG CTGTATAG
 
Protein sequence
MDRVEVVSIG YRVAHQWNLL LFTVLAITGG ALFAIEVLAP LVYAVGAPLA AAVGTDAVTA 
GVQLFRIAHR FLGHIWGALL LVYAVNLLLF KKVRIFDAFR KPLGQQIREA KALAGHYLFG
RPLPEDVKTS MERHNVFVAY MALVLIASVV LLSISGVALV YRDALGLSLA EARLMLLLHD
VGFALGLLFV ALHIFAVLHP TNRPLLNAMF NDGTIPLDWA KTHMPNYLRR RGIAV