Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1996 |
Symbol | |
ID | 4617590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1813419 |
End bp | 1814126 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639785087 |
Product | formate dehydrogenase, cytochrome b556 subunit (formate dehydrogenase gamma subunit) |
Protein accession | YP_931486 |
Protein GI | 119873479 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0143456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGAG TGGAGGTTGT AAGTATTGGG TATAGGGTTG CCCACCAGTG GAATTTGTTG TTGTTTACTG TGTTGGCGAT TACTGGCGGC GCTCTATTTG CCATAGAGGT TTTGGCCCCT CTGGTGTACG CGGTGGGCGC CCCCCTGGCG GCGGCGGTGG GCACAGACGC CGTTACAGCC GGCGTGCAGT TGTTTAGAAT TGCCCACAGA TTTCTAGGGC ATATATGGGG GGCGTTGCTC TTGGTGTACG CCGTCAATCT ACTCCTCTTT AAGAAGGTGA GGATTTTTGA CGCCTTCCGC AAGCCGCTTG GCCAACAGAT TAGGGAAGCT AAGGCGTTGG CTGGGCACTA CCTCTTCGGC AGGCCGCTTC CCGAGGACGT CAAGACGTCT ATGGAGAGAC ACAACGTGTT TGTTGCCTAC ATGGCGCTTG TGCTTATCGC GTCGGTAGTA CTCCTCTCTA TTAGCGGCGT GGCGCTTGTC TATAGAGACG CCCTAGGCCT ATCTCTAGCG GAGGCGAGAC TTATGCTGTT GCTACACGAC GTCGGCTTCG CCCTAGGGCT ACTCTTCGTA GCGCTTCACA TATTCGCCGT ACTACACCCC ACAAACAGAC CACTACTCAA CGCCATGTTC AACGACGGAA CCATCCCACT AGACTGGGCA AAAACACACA TGCCAAACTA CTTAAGAAGA CGTGGAATCG CTGTATAG
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Protein sequence | MDRVEVVSIG YRVAHQWNLL LFTVLAITGG ALFAIEVLAP LVYAVGAPLA AAVGTDAVTA GVQLFRIAHR FLGHIWGALL LVYAVNLLLF KKVRIFDAFR KPLGQQIREA KALAGHYLFG RPLPEDVKTS MERHNVFVAY MALVLIASVV LLSISGVALV YRDALGLSLA EARLMLLLHD VGFALGLLFV ALHIFAVLHP TNRPLLNAMF NDGTIPLDWA KTHMPNYLRR RGIAV
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