Gene Pisl_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1986 
Symbol 
ID4618340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1801107 
End bp1801955 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content59% 
IMG OID639785077 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_931476 
Protein GI119873469 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.231709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.140024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATGTT GGGCGTGCGT CGCGGCGTGT AAGCAAGAGT TCGACGTGCC ACTTGGAAAA 
TGGAGGCTGT TTATAACGGA GTATTACGCC GGCGAGTATC CAAACGTCGT TGGCTACATA
CTCCATCTGC CCCAGTGTAA CCACTGTGAA AACGCCCCAT GCGTCAACTC GTGCCCCACC
GGCGCTCTTA GACACAACCC AGAGACGGGC ATAGTCCAGC TGGACAAAGA CCTCTGCATC
GGCTGTAGGG CGTGCACCAG GGCGTGTCCC TACAACGCCG TTTATATAGA CCCCCGTACG
AACAAGGCAG ACAAGTGCAC CTTCTGCGAG CACTTGGTCT ACTCGGGCCT CCTCCCCGCC
TGCGTCGCGG CGTGTCCCAC GGGAGCCCGC ATATTTGGAG ACATCGAAGA CCCCAACTCC
CTCATTGGGA AGCTCTACAG AGAGGGGAGG ATTAAGCCAG TGGGCAAGGT GGCGGAGGTG
GTAAAGCCAA GGCTCTTCTT CGCGCCGTTT GGAGCAGAAA GGCCCATAAA CACAGACGCC
GGCGCGTTTA AGAAAGTGGT CACAGCCGAG GCCAGCAACA GAGCTCTTGT CGACACCGTC
GTTGACCTCA GCACTTGGAA CCCAAACGCA GACCCTGCGC TACAGCCCGG CGCACACCCC
GAGTGGTCTC CTGAGCCAAA CGCGCTGGGG CTCTGGAAGC AGTACAGACC GACGAAGGAC
CCCTCAACTG CGGAGCTGAG CAACATAGTT AGGGATACCC GCCAGGCGTT GGTATACGCG
GCCATTGCGC TGTTGGTAAT CGCCGGCGCG GGCGCGGTAT GGACAGGGCT AATAAAGCCG
GCGCACTAG
 
Protein sequence
MLCWACVAAC KQEFDVPLGK WRLFITEYYA GEYPNVVGYI LHLPQCNHCE NAPCVNSCPT 
GALRHNPETG IVQLDKDLCI GCRACTRACP YNAVYIDPRT NKADKCTFCE HLVYSGLLPA
CVAACPTGAR IFGDIEDPNS LIGKLYREGR IKPVGKVAEV VKPRLFFAPF GAERPINTDA
GAFKKVVTAE ASNRALVDTV VDLSTWNPNA DPALQPGAHP EWSPEPNALG LWKQYRPTKD
PSTAELSNIV RDTRQALVYA AIALLVIAGA GAVWTGLIKP AH