Gene Pisl_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1879 
Symbol 
ID4617426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1698629 
End bp1699597 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content42% 
IMG OID639784967 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_931369 
Protein GI119873362 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATAT TCCATAGACA CAGTATGTCA TTTGAAAGGC TAAAGGTGCC GTTGCCAGGT 
ATGGAGCTTG GCCACATCAA TGTCTATGTT TTCAGGTGTT CAGATGGGTA TGTGTTAATA
GACGCAGGTC TCGCCACGTA TGACGCAGCT CTTGCGCTTA TAAGAGGGCT TAAGTCGCTA
GGCGTAAAAC TTTCAGAGAT TTCGAAGGTG TTTATTACAC ATCTACATGC AGACCATATA
ACTCTTGTCC AATTTCTATC TGAAGTAGCA TCTCCAGATT TTTATATTGG GAAGGAAGAA
CTAAGGGATA CAATAACTTC TTTTGATGAA TTTATAAATA AGTACATAGA TGAATACAAG
AGACACGGAG TTCCAGCCGA CATACTTGAG GCTTTTCTTA AGTTACATCC AATGTCTAGG
TTTAGAAAGG CGTATGAAGA TATATGGAAA TTAAATTGGA AGGGTGTTGG CGATGGCGAA
AAAGTTGGTT GTGGGCTTGA AGCAGTATGG ACGCCCGGCC ACACGCCGGG ACACACAGTA
TATGTGACAA AATTTGGAAT TTTTACCGGC GACCACGTCT TGCCAAAAAT AACGCCAAAT
ATCTCCTGGT ATCCACGTCC AGGGTTTAAT CCGTTGAAGG AGTATTTGTC TAGTCTAAAA
AAAGTCGATT TAAAGACAAG GGGATTTCCG GCGCATGGGG ATGAAATCCC TAATTTATCT
GCCAGAGTTT CGGAGTTGTT AAAACATCAC GAAAGGAGAT TAAACGAAAT ACTAAAGGTA
TTACAAGAGC CTTTAACTAC ATATCAAGTT GCTAAAAGGA TTAGTTGGGA CGCCGGCGCC
TTCGACCAAT TTAATGCATA TAACAAAATC TTTGCCATAG GAGAGGCCCT CAGTCACTTA
ATCTACCTAG AAGAAGCTGG TGTAATACGG CGCGTGGAGA AAGAGGTAGT ATACTGGGTT
CGGCTTTAA
 
Protein sequence
MEIFHRHSMS FERLKVPLPG MELGHINVYV FRCSDGYVLI DAGLATYDAA LALIRGLKSL 
GVKLSEISKV FITHLHADHI TLVQFLSEVA SPDFYIGKEE LRDTITSFDE FINKYIDEYK
RHGVPADILE AFLKLHPMSR FRKAYEDIWK LNWKGVGDGE KVGCGLEAVW TPGHTPGHTV
YVTKFGIFTG DHVLPKITPN ISWYPRPGFN PLKEYLSSLK KVDLKTRGFP AHGDEIPNLS
ARVSELLKHH ERRLNEILKV LQEPLTTYQV AKRISWDAGA FDQFNAYNKI FAIGEALSHL
IYLEEAGVIR RVEKEVVYWV RL