Gene Pisl_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1830 
Symbol 
ID4618029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1661282 
End bp1661908 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content45% 
IMG OID639784913 
Producthydrolase 
Protein accessionYP_931321 
Protein GI119873314 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.797395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00000000137231 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACATACC GCGCGGTTAT TTTTGACGTC GATGGCGTGA TTACGCCGTT TCGCTCTGCT 
TGGCAGAGAC TACACGCAAT CTTAGGCACA GACGCCGAGT TAAATAGAGC TCTCTATAAG
CTAGGTGTTA TAGATTATTA TGAATGGGCG TTATATGATA CATTACTTTG GCATGGGGCG
CCCAAACGTT TAATAGAGGC GCGTTTTCAG ACGAGGAGAG GGCTAGATGC CTTATGTCAA
GTTTTAAAAG AGGCAGGCGT TTATTCAATA GCGCTTTCAG CAGGACTTGG CTATACAAGA
CAGCTTTCTC GCTGCTTCCA TTTTTACGTA GTAAACGAAT TGATATATAG AGACGGCGCT
GTAAATACCG TCGCCGTCTC CGTCAGCGAT AGAAACAAAG ACGTAATTGC TGAACGAATC
TTGGAAATCC TAGATGTAGA ATGGTCTGAG GTTATAGCTG TTGGAGACGG CGAGGCCGAC
CTCTCTATAT TGAAAAAAGC CGGCTATCCA ATAGCCTTTA ATCCCACTAG TGAAGAAGTC
GCCAGAGCGG CAAAAGCAGT GATTAGAGCA GACTCTCTAC ATCCCCTTGC CAAGTATTTA
AAAGCGCTAC TTAGGCAAAA ACTGTGA
 
Protein sequence
MTYRAVIFDV DGVITPFRSA WQRLHAILGT DAELNRALYK LGVIDYYEWA LYDTLLWHGA 
PKRLIEARFQ TRRGLDALCQ VLKEAGVYSI ALSAGLGYTR QLSRCFHFYV VNELIYRDGA
VNTVAVSVSD RNKDVIAERI LEILDVEWSE VIAVGDGEAD LSILKKAGYP IAFNPTSEEV
ARAAKAVIRA DSLHPLAKYL KALLRQKL