Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1809 |
Symbol | |
ID | 4618085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1642320 |
End bp | 1644098 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639784893 |
Product | hypothetical protein |
Protein accession | YP_931301 |
Protein GI | 119873294 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [COG5270] PUA domain (predicted RNA-binding domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0000370304 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTTATATT GGTGCCAAGA TTTAAACTTG CCTGTTTTAG ATCTTAAGAA AGCGACGGGA AAATGCGGCG AATTTATCGA GGTAAGGCTG ACGCAGCCGG CGGATCCTCG GCCGGCTTTT CTCTCAGATA TCTTAACTAC AAGAGAGGCT ATAGTAAACG AATTTAGTGA TGCAAAACTT GCCGAAGTCT TAGTTCCATT AAATGAGGTG GTGTTGCTAA ATAAAATACC CGGCTATGCG GATCAAGCGG ATGAAGTTGT GGTAAGAGGG CGTTTAATAG GCCATAGGTT TTATGATATA TTAGAGCGCC GGTGGAGATT TAGGCCGCTG TATGAAGCTG TGGCAACAAT GATAAAAGAG AGGCTTGGCC ATTGGGCGAT TGTAGATATG TCTGAGCTTC CAGAAGGCTA CGACATACAT CAAGATAAAA TTACAGAGGG GGTTCTGCCT GAGGAAAAAT ATAGACATGT GGCTCTATCG ACAAAAGATG GGAAGATACA TGGAGTTGCC AAGTTGTTTC GCGGTCGCCG GCTACACGTG GTGAAGTCGT GGAGAGCTAA ACCGCCGCTT CCGCCTGGTA AGCCCTCTAG TTTAAAAGAC GCGGCGGAGT TCAACCGGGA GCATATAGAG GAGTTGACAA AAGAGGCAGT TAAATTCATA AGAGAGATTG CGGAGAGGTA CAAAAAGCCG GTTGTAGTCT CTTACTCGGG GGGAAAGGAT AGTTTAGTTG TGTTAGATCT TGTTGTAAAA AGCGGGGTAA AGTTTTACGT GTTTTTTAAC GACACCGGGC TTGAGCCGCC TGAGACTTAT GAAAATATCA AGAAAATACA GGAGTATTAT GGCGTTGAGA TAATTATAGG ATCAGCTGGG GATAGGTTTT GGAGGGCGAT AAAGGCCTTT GGGCCGCCTG CCAGAGACTA CAGGTGGTGT TGTAAAGTGA TAAAGCTAGG CCCCACCACC GAGGCTCTCA AAAGCCGGTT TCCTCAGGGC TATATAAGCG TTGTGGGGCA GAGAGGCGCT GAGTCTTTCC AAAGGGCTAA ACTACCAAGG GTGTCTCAGA GCAAGTGGGT GGCGGGCGCT ATAGTGGCGG CGCCGTTACA AAACTGGACT GCGCTAGAGG TCTGGCTGTA TATATTCTTA TACGGCCTGC CCTACAACTC GGCATATGAA CGCGGTTTTG ACCGACTTGG CTGTGTCGTA TGTCCAGCTA ATGAGCTTGC GGAACTTGTC CTTGTGGCAA AGAGCTATCC CGAGATTTAT GAAAAAATGG AGGAGGAGTT ACGTAGGTTT TTCTCAGAGG AGGATATAAG ATTTGGGTTG TGGAGGTGGC GTGGCAAAAT ACCCGGCGAT ATGGCTAGAT ATATTAAGAA AGAAAAGGGC GTGGAACTAC CTGTAGATGT AAGAAGAGAG GGCAGAGATA TTCTCATAAA AATAAACGTA GAGCCTAACG TCGAAATTTT CAAACAGTTT TCTAAAATGT TGGGAGAGGT AAAAGACGGC CAGATAGTGA CAAAGAGCGG AGTTGTAAAG GTTGAGGGTA AAGACGGCAT TTGGAGGATA TCGACAGAAG ACGGAAAATT AGCGCTAGAC GTAGCCGCGC TACTCGTACG TTCTGCAATA TGTGGAGACT GCAACCTATG TGTATATTGG TGTCCCACCG GCGCGCTTAA GAAAGTGGAG AACAGATTTG AAGTAGATGA GAAAAAGTGT ATGAGATGTC TCCTCTGCAA TTCTGTATGT CCAGCAGCCC AATATTTAGT ATATAGAAAT AGTGAGTAA
|
Protein sequence | MLYWCQDLNL PVLDLKKATG KCGEFIEVRL TQPADPRPAF LSDILTTREA IVNEFSDAKL AEVLVPLNEV VLLNKIPGYA DQADEVVVRG RLIGHRFYDI LERRWRFRPL YEAVATMIKE RLGHWAIVDM SELPEGYDIH QDKITEGVLP EEKYRHVALS TKDGKIHGVA KLFRGRRLHV VKSWRAKPPL PPGKPSSLKD AAEFNREHIE ELTKEAVKFI REIAERYKKP VVVSYSGGKD SLVVLDLVVK SGVKFYVFFN DTGLEPPETY ENIKKIQEYY GVEIIIGSAG DRFWRAIKAF GPPARDYRWC CKVIKLGPTT EALKSRFPQG YISVVGQRGA ESFQRAKLPR VSQSKWVAGA IVAAPLQNWT ALEVWLYIFL YGLPYNSAYE RGFDRLGCVV CPANELAELV LVAKSYPEIY EKMEEELRRF FSEEDIRFGL WRWRGKIPGD MARYIKKEKG VELPVDVRRE GRDILIKINV EPNVEIFKQF SKMLGEVKDG QIVTKSGVVK VEGKDGIWRI STEDGKLALD VAALLVRSAI CGDCNLCVYW CPTGALKKVE NRFEVDEKKC MRCLLCNSVC PAAQYLVYRN SE
|
| |