Gene Pisl_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1758 
Symbol 
ID4618064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1591459 
End bp1592352 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content60% 
IMG OID639784842 
Producthypothetical protein 
Protein accessionYP_931252 
Protein GI119873245 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0216697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTAG ATTCTAGTTT GTACAAAATC GCGCGGGAGG CGGCGCTGGA CGAGTATAAA 
GAATATATAG TGTACAGCGC CTTGGCGCGG GTGGAGAGAA ACGCGGGGCG GAGGGGGGTT
TTGGAGACTT TGGCGGCAGC TGAGCTGGAC CACTTCAGGT TCTGGAGCCG TATCGCCGGC
GTGAGGCCGC CGGTGTGGCG GACGCGGCTC TACGCCTTGT TTATGGTTCT CCTGCGGTTT
GTCTTTGGGG TTACCTTCGT GGCTAAGCTT CTGGAGCGTG GGGAGGTGGA GGCGGTGGCG
CGGTACAAGT CCCTCCTGGG GGTGCTCCGG GGGGAGGATC TGGAGGCCCT CCGCCGCATT
ATTAGGGATG AGGAGGAGCA CGAGGTGGCG CTTGTGGAGC AAATCGACGA GACTATCGTG
AGGTACATGG GGTCTCTGGT GTTGGGTCTG GCGGACGCGG TGATCGAGAT CACTGGGGCC
CACGCGGGGA CTCTGGGCAC CACCAACAGC ACCGTTGTGG CGGGGGTCAT CGGCCTTATT
GTGGGGATAG GTGCCGCCAT CTCCATGGCG TCTGCCTCCT ACCTCCAGAC GCGCCACGAG
GTTGGGAAAT CCCCCGCAGT GGCGGCCTTG GTTACTGGCG TGGGCTACAT TGCGGCTGTG
TCTCTCATGT CGCTTCCCTA CTTCCTTACC CACGACATCT ACCTCGCCTT CGCCGCCTCT
ATCGCCGTGG GGGTTCTGCT GAGCTTCATG TTGACCTTCC AGGGGTCTGT ATACACGGGG
AGAGATTTCA AGTACGAGTT TCTGCAGACG GTGGGTCTTC TGCTGGGGAC CGCCGCCCTG
ACCTATATGT TGGGCGAATG GCTGGGGCGT CTCTTCGGCG TTAGAGTTAT TTAG
 
Protein sequence
MEVDSSLYKI AREAALDEYK EYIVYSALAR VERNAGRRGV LETLAAAELD HFRFWSRIAG 
VRPPVWRTRL YALFMVLLRF VFGVTFVAKL LERGEVEAVA RYKSLLGVLR GEDLEALRRI
IRDEEEHEVA LVEQIDETIV RYMGSLVLGL ADAVIEITGA HAGTLGTTNS TVVAGVIGLI
VGIGAAISMA SASYLQTRHE VGKSPAVAAL VTGVGYIAAV SLMSLPYFLT HDIYLAFAAS
IAVGVLLSFM LTFQGSVYTG RDFKYEFLQT VGLLLGTAAL TYMLGEWLGR LFGVRVI