Gene Pisl_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1671 
Symbol 
ID4616461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1516692 
End bp1517366 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content40% 
IMG OID639784754 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_931166 
Protein GI119873159 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.026976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAAGAA TTGAGACAGT TGGTAAATAT ATCAAGGTGG TATTAACAGG CGAAAAGAGA 
AACGTCTTCT CGCTTGAGAT GATAAACCAA CTAATGAATG TAAGTTGTGA TAGAGATGTC
TTGGTAACTA ATGAAGGGCC TGTGTTTTCC TCAGGTCTTG ACCTCTCTAT ATTTTTACAA
AATAAAGATG ATGTCTTAGA GTATCTCTTT AAGATCCATA GATTCGTGAA GAAGATCCTT
AGCTGTCCGG GCCGCGTGAT TGCATATGTT ACTGGGGATG TATACGGCTT TGGGGTAGAA
TTTCTATATT TTACTGACTA CGTTATTGCC TCTAGCGAGA ATATTAAGTT CTCATTGCAA
GGCATAAACT TCGGGGTGTT TCCACCGTAC ACCATAGCTA TAGGAAATCG ACTATTTCCT
ATAGGATATC TGAAAGTTAT GTTGAATAGA GAATTTTACA CACGCGAAGC TCTTTCATTC
GGAATAGTGT CTGAAATAGG CAGTCTAAGC ATAGAGAAGT TATTTTCGCC GCCAGTTTAT
ACACAAGAAC ATATAAAGCC TCGACGTTGG CTACTAGACG TAGTAGAGGA GGCTGTTCCG
TATCTTTTCA AACTGGCGGA GATCGGTACA CGCGAGGAAA CTAGAGAACG TATTAGAAAG
TTTCTAAGGC GTTGA
 
Protein sequence
MVRIETVGKY IKVVLTGEKR NVFSLEMINQ LMNVSCDRDV LVTNEGPVFS SGLDLSIFLQ 
NKDDVLEYLF KIHRFVKKIL SCPGRVIAYV TGDVYGFGVE FLYFTDYVIA SSENIKFSLQ
GINFGVFPPY TIAIGNRLFP IGYLKVMLNR EFYTREALSF GIVSEIGSLS IEKLFSPPVY
TQEHIKPRRW LLDVVEEAVP YLFKLAEIGT REETRERIRK FLRR