Gene Pisl_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1652 
Symbol 
ID4618145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1502893 
End bp1503252 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content43% 
IMG OID639784735 
Producthypothetical protein 
Protein accessionYP_931147 
Protein GI119873140 
COG category[R] General function prediction only 
COG ID[COG1645] Uncharacterized Zn-finger containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.939186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0110267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAA TAGCCCAACT AGTTAGGGCC GGCGCAGCTC TTACGCCGTA TACTTGTCCT 
GTCTGCGGTA CCGTATTAGT GAGATTAAAA ACGGGAGAGC TCTACTGCGC CAATTGTGAG
AAGACTGTAG TACTTGTAAA ATCTGAAGAG GAGGCACAAC AAGCGCTAGA GGTAATTCAG
CTAAGAGAAG TCAGGAAAAT AATTTTTGAC AAAATTCTAC AGCTTGGTAG AGAGTTAGAA
AAGCTAACGG CATCTGAAAT GGTAGACCAT CTACGGTCTA TGTCTCTACT TCTCGACATA
TACGAAAGAC TAAGTCGTAT CCATACAGAA GTAAGCAAAC GCCAATCTAC TTCCTCCTAG
 
Protein sequence
MKKIAQLVRA GAALTPYTCP VCGTVLVRLK TGELYCANCE KTVVLVKSEE EAQQALEVIQ 
LREVRKIIFD KILQLGRELE KLTASEMVDH LRSMSLLLDI YERLSRIHTE VSKRQSTSS