Gene Pisl_1633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1633 
Symbol 
ID4617856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1481472 
End bp1482524 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content43% 
IMG OID639784716 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_931128 
Protein GI119873121 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGTT TAAACATAAT TATGGACCTC TGGAATCTCC TTCTCTCACA GCGTCTTTGG 
TTCTTTATAA TTATGTTTAT TGCATCTAGT GTTATATTAC TTACTGTAGT TTGGTTTGAG
CGTAAGGCTG CGGCGAGGGT ACAGATGCGT GTGGGTCCTT ACCACGTCTC GCCTTGGCTC
GGCGGCTATC TCCAGCTACT TGCAGATGCG TTTAAATTCA TAATAAGTGA GCCGATTATA
CCCAAAGGGG CGCATAAGAT TCTCTTCGTC TGGGGACCTG CCATTTTTAT AACTCTCGCA
TTTGGCGCAT CTCTTCTCCT TCCGTTAACT CCAGAGTTAA GACTGATTAA AGACGTCAAC
CTACTCCCAT ATGGCTTAGT GTTTTCTTTG GTGATTCTTC TCCTAGTATC GATCTCTGTT
GTAATCATAG GCTGGTCTGT GAATAATAAA TTTGCGTATA TTGGAGCAGT ACGCGAGGCG
CTTTTAGTAA CGGCGTATGA AATTCCGCTG ATACTCTCTT TTCTCGCTAT GGCAATTTTA
TATGGGACGT TAAACCCCAT AGAGATAGTA AATAAACAGT CTTTGCTTGT AGGCGCTATA
CTTAATCCAC TAGCGTTTTT GGTATTTATT ATAGCTACCG CTATGGCCAC GGCCCGCTTC
CCCTTTGAAA TAGCAGATTA TGAAGGAGAC GTAGCCACAG GTCCCTATAG CGACTACGGC
GGCATATTTC TGGTTCTTTC TTTTGCAGGC GGAACCTATT ATGCCACCTT CTCCTTCTCT
TTTTTCGCCA CGCTCTTATT CCTTGGCGGA TGGGCTCTTC CTAGCTATGT CGTAGGTCCC
TGGCCACAAG ATTTGTTAGG CCACCTAGTG TTAGCAGTAT GGGTCTTTCT AAAAGTTACA
ATATTGATGT TTTTATTCGC ATTTCTAAGA GCCGCAATGC CCGTACTTAG GCTTGATCAC
ACGCTTATAC TTGGTTGGAG AGGTCTCCTA ATACTTGGAT TTATAGCTGT AGTATGGTCA
ATAATACTAA GGATTTTAGG GGTGGTTCCA TGA
 
Protein sequence
MSGLNIIMDL WNLLLSQRLW FFIIMFIASS VILLTVVWFE RKAAARVQMR VGPYHVSPWL 
GGYLQLLADA FKFIISEPII PKGAHKILFV WGPAIFITLA FGASLLLPLT PELRLIKDVN
LLPYGLVFSL VILLLVSISV VIIGWSVNNK FAYIGAVREA LLVTAYEIPL ILSFLAMAIL
YGTLNPIEIV NKQSLLVGAI LNPLAFLVFI IATAMATARF PFEIADYEGD VATGPYSDYG
GIFLVLSFAG GTYYATFSFS FFATLLFLGG WALPSYVVGP WPQDLLGHLV LAVWVFLKVT
ILMFLFAFLR AAMPVLRLDH TLILGWRGLL ILGFIAVVWS IILRILGVVP