Gene Pisl_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1612 
Symbol 
ID4618258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1462887 
End bp1463915 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content47% 
IMG OID639784697 
ProductFAD dependent oxidoreductase 
Protein accessionYP_931109 
Protein GI119873102 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGTAG TCATCCTTGG CGGGGGGATA GCGGGCGTAT TCACTGCATA TTTCCTCAAG 
AGAAGGGGCT TCGAAGTTGT CGGAATAGGC GGCGAGGTTA CATATCCCAC GGCATCTTTA
GTATTAACGC TATCTATGCC GCATAAAGAG GATGTGGAAC TTGCCAAAAG AAGTCTCGAG
ATTTATAGAG AATTTGTAAA CCCTAGAGAG GTTACGTCAG TAGATATCCT CCCGAGGTGG
GTAGATTTAT CTAAACTAGC CGTCCCTCAC GAGGTTGTCG ACGCGATAGA CGGCATACGA
CTGAGCCAAG ACGAGGTTGC TGTGATAACA AAAGACTATC TCATCCCTGT TAGAAAAGTC
GTGACAAAGT TAAGGAGGGA ATTAGGTTTT GTAGACTCCT ACGGGTTGTT GAAAATCAAA
GATAGAAAAG CCTATGTAGT TGTAGATGGG GAGAGAGTAG AGGGTGACGT AGTGGTATTA
GCAGCCGGGT ATAGAAACAA TATATTGGCA CAAGAGGCCG GCGTATCTCT CCCACTGGCC
CCTTATGAAT GTTACGCCGT GGTATATCTA GTTGGTAGAA AAGTGTGGAG ATATAGCATC
GGCGATTATA TACTGGGTTG GTATGGAAGA CCTCTTTCGC CTCCTTTATA TATAGCTGGA
GATGGCTGTG GACGCTATGG ACAAGGGCCG CCTCCTGGCT ATATGCAGAA AATCACTAAC
TTGATAAGAC AGAGGGTGGG ACATATATTT CCGCTCTACT TAAAGACTGG GTATTGTGAA
ATAGGCCCCC ACGGAGGGCC CATCTATGGC AAACACCCGG AGGTAGAAAA TCTCTATGTG
ATAGGGGGGC TCGATGGCTA TGGCAGCATG GTTGGACCTG CGCTAGCGGA GCGGCTTGTG
GAATTAATCG CCGGCCGTGG GGCGGAAGAT GTCTATAGAC TTGAGAAATA CTTTGGTATA
CAAGTGTCTA ACCCGTGCAA TATAGCTGAA CGACACGATT GGAGCGCCGT TTTACTACGT
AATGCTTAA
 
Protein sequence
MRVVILGGGI AGVFTAYFLK RRGFEVVGIG GEVTYPTASL VLTLSMPHKE DVELAKRSLE 
IYREFVNPRE VTSVDILPRW VDLSKLAVPH EVVDAIDGIR LSQDEVAVIT KDYLIPVRKV
VTKLRRELGF VDSYGLLKIK DRKAYVVVDG ERVEGDVVVL AAGYRNNILA QEAGVSLPLA
PYECYAVVYL VGRKVWRYSI GDYILGWYGR PLSPPLYIAG DGCGRYGQGP PPGYMQKITN
LIRQRVGHIF PLYLKTGYCE IGPHGGPIYG KHPEVENLYV IGGLDGYGSM VGPALAERLV
ELIAGRGAED VYRLEKYFGI QVSNPCNIAE RHDWSAVLLR NA