Gene Pisl_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1576 
Symbol 
ID4617099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1437429 
End bp1438001 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content47% 
IMG OID639784659 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_931073 
Protein GI119873066 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTT TTGTAGGAAT TACAGGCGCC TCTGGCGTAA TATACGGGGT GAAAGTGTTA 
GAGCTATTGA GGAAAGCCGG CGTGGAAATC CACTTATCTA TATCTAAGAC TGCAGAAAAA
ATACTGAAGT TAGAAACAGA GTACGACACG GCATATGTGA CTTCTCTCGC CGATTATGTA
TGGGATGAAA ACGACCTAAC AGCGCCACCT GCCTCAGGTA GTTTTGGCAT AGACGCCGTA
GCGATAGTGC CCTGTTCCAC AAAGACACTA GCCGCAATTG CAAACGGCGT GACACTTAAT
TTAATTACAA GAGCCGCCGA GGTGGGGCTT AAGGAGAGGA AGAGGGTGGT GTTAGTCATT
AGAGAAAGCC CCCTCTCTCT AATCCACATA AAAAACATGG AACTTGCGAC TATGGCTGGC
GCAGTGGTTA TGCCGGCGTC TCCAGGTTTT TACACAAGGC CGAAGGATCT AGATGAGTTA
GTAACAACTT TTGCAGGCCG CGTGTTAGAT GTCCTTGGGA TAAAACACGA GTTCACGCCG
AGGTGGAGAA GACACGAGAA AAGTTTGAAA TAG
 
Protein sequence
MRVFVGITGA SGVIYGVKVL ELLRKAGVEI HLSISKTAEK ILKLETEYDT AYVTSLADYV 
WDENDLTAPP ASGSFGIDAV AIVPCSTKTL AAIANGVTLN LITRAAEVGL KERKRVVLVI
RESPLSLIHI KNMELATMAG AVVMPASPGF YTRPKDLDEL VTTFAGRVLD VLGIKHEFTP
RWRRHEKSLK