Gene Pisl_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1574 
Symbol 
ID4618211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1436372 
End bp1437211 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content47% 
IMG OID639784657 
Productprotein of unknown function DUF340, membrane 
Protein accessionYP_931071 
Protein GI119873064 
COG category[S] Function unknown 
COG ID[COG2431] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAG TTACTAAATA CATGTTGCCT ATTGTTATCG GCTATATAGC GGGGAAGATT 
CTAAGGAGGA GACCGCCGGC GTTAATTTTT ACAGCGCTTG TCGTACTGCT TGTGTTTGTC
GTCGCCGCCA ATACCGCAGA CAAGGTGTTT GAAAGCGTAG GGGTTTTCCT CGCTGTGTCT
ATTCTCTACG CGCTTGCCTT GGTCTTGGTA ACAGGTCTCC TCGGCTCTTT TCTTGACGCA
CCAAGCCGCG TTGGCCCCGT TGGTATGCCC TCTATTTCGG CGTATGTTTC TATAGCGCTG
GCGGCAGGTT TTATAACAGG CATATTCATA AAAATTCCCT ACGTCTTGGC GATAGATCCT
CTTCTTCTAG TTCTTCTATT TACCGCTGGG ATGGACATGG CTAACGTAGG CATTAGATTA
GAAAAGGCTG TGCTTCTTGC GCCAGCGGCG GCGCTTCTCG GCGCAGGTAT AGTAGGTTTC
TTGTTCGCTA CGACTCTAAA TATAACACCG GCTGTGGCTT TTGGCATGGG TTGGTACAGC
TTCACAGGGC CGTATCTTGC TAACGCCGGC GATAAAACCG GAGGGGCATA CGGCCTCTTG
ACGAATTTCC TCCGTGAACA ATTTACATTT CTCCTCGGGC CTATATTAGC TAGAAGATTT
GGGAAGGTGA GTATATTGGC TATCGGCGGC GCGACGACTA TGGATAATAC CCTTCCTCTT
TACATAGCGC TATACGGCCC CTCTTTTTCA CTCTATGCTT TTACAAACGG TGTAATTTTA
ACATTTATAG TCCCAACACT TGTCCCTATA GTACATCAAG TCTATAGTTG TTGTAGATAG
 
Protein sequence
MIEVTKYMLP IVIGYIAGKI LRRRPPALIF TALVVLLVFV VAANTADKVF ESVGVFLAVS 
ILYALALVLV TGLLGSFLDA PSRVGPVGMP SISAYVSIAL AAGFITGIFI KIPYVLAIDP
LLLVLLFTAG MDMANVGIRL EKAVLLAPAA ALLGAGIVGF LFATTLNITP AVAFGMGWYS
FTGPYLANAG DKTGGAYGLL TNFLREQFTF LLGPILARRF GKVSILAIGG ATTMDNTLPL
YIALYGPSFS LYAFTNGVIL TFIVPTLVPI VHQVYSCCR