Gene Pisl_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1570 
Symbol 
ID4616726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1433677 
End bp1434360 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content48% 
IMG OID639784653 
Productacetyl/acyl transferase related protein 
Protein accessionYP_931067 
Protein GI119873060 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTTA TCTCACCAAA GGCAAAGATC TATGCTAAAT ATGTCTCGCC TGATGCATAC 
ATATATGGCC CCAGTATAGT TGGGAGGGGT AGTTTTATAG ATACAGCGGT TATCGGCTAT
CCAATACGTC AAAAGATACT ACAGGGCTTT TCTACACCAG ATGACGTCAG CAAGGGGGCG
GTGTTGGGCG AGGCTGTTGT AGTAAGGACT GGAGTTGTTA TCTACGAAGG CGTCGAGATT
GGAGACGGAG TTGAATTTGG CCACAACGTG TTGGTGAGAG AAGATACGAA AATTGGGAAA
AATGTGAGAA TCGGCACACT GTCTGTAGTA GAGAGGGGGG TTAAAATTGG AGATGGGGCA
TGGATACAGT CCATGGTCTA TATTCCAAAT GGGACTGTTA TTGAGGAGGG GGTCTTCATA
GGTCCTAACA CCGTGATTAC AAACGATAAG TATCCGCCTA GTAAAAGACT AGCCCCCGTC
ATAATTAGGA GGGGGGCTGT AATTGGGGCA AATGCCACGT TGTTAGCTGG GATTGAGATC
GGAGAGGGGG CTGTGGTAGC TGCCGGCGCT GTTGTAACTA GAGATGTGCC TCCAGGCGTA
GTAGTGGCGG GGGTCCCCGC CAGAGTTATT GGAAAGGCTG AAGAATATCT GAGGAAAAAA
GCTATTTACG AAGAGTCAGC GTAG
 
Protein sequence
MGFISPKAKI YAKYVSPDAY IYGPSIVGRG SFIDTAVIGY PIRQKILQGF STPDDVSKGA 
VLGEAVVVRT GVVIYEGVEI GDGVEFGHNV LVREDTKIGK NVRIGTLSVV ERGVKIGDGA
WIQSMVYIPN GTVIEEGVFI GPNTVITNDK YPPSKRLAPV IIRRGAVIGA NATLLAGIEI
GEGAVVAAGA VVTRDVPPGV VVAGVPARVI GKAEEYLRKK AIYEESA