| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1542 |
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| Symbol | |
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| ID | 4617998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 1408191 |
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| End bp | 1409219 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639784625 |
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| Product | CRISPR-associated RAMP Csm5 family protein |
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| Protein accession | YP_931040 |
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| Protein GI | 119873033 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1332] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01899] CRISPR-associated RAMP protein, Csm5 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.749517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.215937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTA GAGGCATGGA GATTAAGCTC TCTCCCCTGA CGCCTGTCCA TGTGTGGAGC
GGAGATGTGT TGGTGGTGGG ATACGACATA GTGGTGAAGG ATGGCGATGC GTGTATAGTA
GACGTAAACC AACTGCCCAC CGAGGTTATC GAGAAAGTGG CAGATGACCT AGCTCCGTTG
GATAGATACG CGGACAAGGT GAAATGTAGC CGTGTCTTGA AGCTCCGCTC GGATTTGTCG
AGCAAATTAG TTTACGACAT CAGCCCGTGG TACGTCCCCG CCTCCACGCT GAAGGGCTAC
ATCCGCACCG CCCTCTTGTA CAAATGGCTA GGCGAGCGGC AAGACGCTAT GAGGCTCATA
GAACAGGCGG TGAAACAAGA CCGGAGGCCG ATCGGGTCGC TACTTGAGGA TAGGCTTATG
AGGATGCGAA GCCCAAGAGT TGATGTAATG CAAAGCTTGA GGATTTGGGA GACTAAAGCC
AAGGCGGAGA CCGCGATAGT AGATATCCAC GTGAAAAGGT TGCCCTCCCT TTCCTCTGTG
GCAAAGGTGT CGGCGGTTGC CTTAGTGGGG GGCGAGCTGA GATACGGCAT AGAGTTGACG
CCCTTTAGAC CTAAAGTCAG AGGCCAAACG GAAGAGCTTG CCAACGCAAT CAAGCTGTTG
GAAAAGTTGC CTCATCTCGG CGTAGACCAC ATCCGAGAGG CGCTTAGGCA GTTCGGCTGT
AGGTTGCTGG AAAACGAAAT AGAGCAGGCT AAGAGACATA AGAAATTGGC CCCCTATGTT
GAGGCGCTGG AGAAGTGGAG GAGTAAATAC TGCAAAGCAG ACGAGGCGTG TGTAATCGCG
AGGATGGGGC GGATGACCGG AATATACTCT AAGACGGTTA TATCAATCAT AAGGGAGAAG
ATGCCGGATG TCTACGAGAT GCTGTTGGAG AAACATTTTC ACAAGAGGCA TGACTTTAAT
ACCCTAAAGC TTGTGGAAAT AGATGGAAGA CAGTTGGGAG TTGGCTGGTG TGAAATATGC
CTGACCTAA
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| Protein sequence | MAFRGMEIKL SPLTPVHVWS GDVLVVGYDI VVKDGDACIV DVNQLPTEVI EKVADDLAPL
DRYADKVKCS RVLKLRSDLS SKLVYDISPW YVPASTLKGY IRTALLYKWL GERQDAMRLI
EQAVKQDRRP IGSLLEDRLM RMRSPRVDVM QSLRIWETKA KAETAIVDIH VKRLPSLSSV
AKVSAVALVG GELRYGIELT PFRPKVRGQT EELANAIKLL EKLPHLGVDH IREALRQFGC
RLLENEIEQA KRHKKLAPYV EALEKWRSKY CKADEACVIA RMGRMTGIYS KTVISIIREK
MPDVYEMLLE KHFHKRHDFN TLKLVEIDGR QLGVGWCEIC LT
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