Gene Pisl_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1497 
Symbol 
ID4617725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1364749 
End bp1365915 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content45% 
IMG OID639784580 
Productglycosyl transferase, group 1 
Protein accessionYP_930996 
Protein GI119872989 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.949751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATTA GCTTGGCCAT ATACAGCGTG CTCAATGTTG GCTATGGGGG CGGATTTGAG 
AGGTGGCTAT ACGAGACGGT CAGCAGATTC AGCGCCAGAG GATACAAAAT TACGGTAATC
ACTACAAAGG CCGGGAGAGT TAGAGATGCG AAAGCAAAGA GTCGTTTTCT AAGTCTGCCG
AACGTGAACC TCGTCGAACT GAACAACGCG GACAAGCCGT TCACAATCCC GACGGACCTT
AGAAAGTTCT TCAAAACATT AAGCGACGCC GAACTCCTGT ATTTCAATAA CGCATTCGCT
GCAAACGAGC TCTTGGCGTA TCTAGCGAGA AAGTTCAAAG GTCTGAGGGT TATAAGCGGT
TATCTTGGCA CCTTTCACAA CGTCGGCGGA TTCGCCCGCA TGGCTTACCA CACATCAATC
AACTTAACAG TAAGCAGGCA TTTCGACGCA CATCATGTGC TCAACAAAGA ACGGCTTAAC
TGGCTAAAGT CGCTAGGCTA CAAAAACATA TACTACATTC CGCCTGGCGT TGACCTAAAC
AAATTTAGAC CTATCCGCGA AAAGGCGGAG ACCTTCACCG TACTGTTCGT AGGGCGGCTA
GAATACCAGA AGGGGTTCGA CATGCTTGCT GAGGCTATCC ATGTACTTAA TATAAGAGAC
AGAGAGAAAA TACGGTTTTT AATCTGCGGC GACGGCTCCC TCGCAACCGT AGCAGAGCTC
CTAACGTCAA GATACGACAA CGTCCACTGG AAAAAATGGT GCGAAGAGAA AGAGCTCATA
GAAATGTATA GCACATCGCA TATAACTGTA GCCCCGTCTA GGTATGGGTA CGAAGAATTC
CTATTAGTGC CGCTTGAGTC AATGGCTTGC GGCACACCTG CAGTCACCAC AGACATCCCG
GGACCCAGAG AATACGTAAG AAACTTCTAT AATGGGCTCA GAGTCCCACT TGACAAAGAA
TACATAAAAT ATGCTATAGA ATTTTTCAAA AATATTTGGT ATAAAAATAG AGAATTATAT
TTTAAATACA TCAAAAATGC TTTGGATACT GCCTCGGCAT TTGATTGGAA TAAGGTAATT
AATAAACTGG ATAATATGTT TAGACATGTG CTGTGCTGCA CGGAAACTCA GGAGAATTCT
GGCTATGAGC ATAGGCCGAA TATATAA
 
Protein sequence
MGISLAIYSV LNVGYGGGFE RWLYETVSRF SARGYKITVI TTKAGRVRDA KAKSRFLSLP 
NVNLVELNNA DKPFTIPTDL RKFFKTLSDA ELLYFNNAFA ANELLAYLAR KFKGLRVISG
YLGTFHNVGG FARMAYHTSI NLTVSRHFDA HHVLNKERLN WLKSLGYKNI YYIPPGVDLN
KFRPIREKAE TFTVLFVGRL EYQKGFDMLA EAIHVLNIRD REKIRFLICG DGSLATVAEL
LTSRYDNVHW KKWCEEKELI EMYSTSHITV APSRYGYEEF LLVPLESMAC GTPAVTTDIP
GPREYVRNFY NGLRVPLDKE YIKYAIEFFK NIWYKNRELY FKYIKNALDT ASAFDWNKVI
NKLDNMFRHV LCCTETQENS GYEHRPNI