Gene Pisl_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1466 
Symbol 
ID4616713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1336620 
End bp1337831 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content63% 
IMG OID639784549 
Productglycosyl transferase, group 1 
Protein accessionYP_930965 
Protein GI119872958 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGCT ACGCCGTCGT CGCCCACCAC TACTGGGGCA CCCCAGGCGG GGGCCAGCTC 
GTCTGCGCAG CCGCCGCCAA GGCGCTGGAG GAGGCGGGCT ACAGGCCGGC CCTAGCCGGC
ACCTTTAAAT TCGACCCCCG GAGGTACGTC GAGTGGTACG GCATAGACAT ATCTAGGTAC
CCCGTCGAAA CCCTCCCCAT AGCCCCCAGG GCCTTCGGCC TCTGGAGCAG GCTCTACGTC
TGGCTCCCCG CCAAGAAAGC CGTCAAAAAG TACAAGCCAG AGCTCCTCTT CATCGACGAA
GTCACCTACA AGCCCCTCGC CAGGGGGAGG AGGTTCAGGC TCGTGGAGTA CATCCACTTC
CCCTTCGAGG TTGTTGTCGA CCCCAGGTAC AGGGGGACTG GCCTCGCCTA TGGGGAAGAC
CCATACATCA TGGAGCGTTA CGGCAGATTC CCCATGAGCC TCTACTGGAG GGCCTTCGTC
TGGGGACTCA AGAGATACGC CAGAGAAAAC CCCTTCCACT ACGCCGACGC CGTGTTGGTC
AACTCCCGCT GGACCGCCCA AGTGGCCAAG ATGGTATACG GCCAAGAGCC CCAGGTCCTC
AACCCGCCCC TCCCCCCAAA CGTAGAGGTG GTCGAGAAGC CGAGGCCCTT CGAGGAGAGG
GAGCCCACAG TCGTGATGCT AGGCCGCTTC TCCCAGGAGA AGCGCTACCA CTGGGTCGTC
ACAGAGGTCG CGCCCAGGCT GTTGAAGGAG GTCCCCGGCG CCAAGATCAT AATCTTCGGC
GGCGCCGCCA CCCCCACCCT ACAGGCCTAC AGAGACAGGG TGAGGAAGAT GGCGGAGGAG
GCCGGCCTAA AGACGGCAGA GACGCTAGAC GCCCACGCCC ACATCTATCT AATAGCCAAC
GCCCCCCGCC GCGTCATAAA CGACGCCATG GACAAAGCCA GGGCCTTCCT CCACGCCACT
ATAAACGAAC ACTGGGGCAT AGCGGTGGCG GAGGCCATGG CCCGAGGCCT CACGCCGGTG
GTACACAAGT CCGGAGGCGC CTGGACAGAC CTCGTCATGG AGGGCAGATA CGGCCTAGGC
TACACAACCG CCGAAGAGGC CGTAGAGGCG CTGGCGAAGC TCCTCACCCA AAAGGCCAAC
TACGCCCCCC AGGAGAGGGC CCGGGAGCTG GTCTTCCAAA ACTTCGCCAG CGCCCTCCGG
AAGTACATAT GA
 
Protein sequence
MERYAVVAHH YWGTPGGGQL VCAAAAKALE EAGYRPALAG TFKFDPRRYV EWYGIDISRY 
PVETLPIAPR AFGLWSRLYV WLPAKKAVKK YKPELLFIDE VTYKPLARGR RFRLVEYIHF
PFEVVVDPRY RGTGLAYGED PYIMERYGRF PMSLYWRAFV WGLKRYAREN PFHYADAVLV
NSRWTAQVAK MVYGQEPQVL NPPLPPNVEV VEKPRPFEER EPTVVMLGRF SQEKRYHWVV
TEVAPRLLKE VPGAKIIIFG GAATPTLQAY RDRVRKMAEE AGLKTAETLD AHAHIYLIAN
APRRVINDAM DKARAFLHAT INEHWGIAVA EAMARGLTPV VHKSGGAWTD LVMEGRYGLG
YTTAEEAVEA LAKLLTQKAN YAPQERAREL VFQNFASALR KYI