Gene Pisl_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1398 
Symbol 
ID4617760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1267220 
End bp1268155 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content63% 
IMG OID639784485 
Productphosphoesterase, DHHA1 
Protein accessionYP_930901 
Protein GI119872894 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGTG TTTTGACGGT CTTTGCACAT GGTGATGCCG ACGGCGTTTG TTCAGCGGCT 
GTTGTTGTGG CGGCACTGGC GGGGGAGTAC GACGAGGTTG AGGTCTATTT TACACATCCA
GTGGACCTGC TGGAGGACTT TAGGGAGTTC GCCCGGGGCG ACGTCTACAT AGTGGACGTG
GCGATAGACG AGAAGGCGGC GGAGGAGGCT GGGCGGGTTT TCGCCGGGTA CGGGGGGAGG
GTGGTCTACG TCGACCACCA CCCCCTTTCC GCCGACTTGC CTCGTGTGGA GGTTGTGCAC
GAGGTGGGCT CCTCGGCCTC CGAGCTGGCG TATAGACTCC TCGGCGGGAG GCTCCCCAAG
TCCTACAGTA GAGTTGCCCT CTACGGCGCC ATCAGCGACT ATATGGATCA CACGCCGTGG
GTTAGGGAGG CGCTGGAGGC TTGGGACCGC CGGATTATAT ACTTCGAGGC GGGGGTTCTG
ATGCAAGGCT TGGAGAGGGC TAGGAGGGAC CACGACTTCA AGAGGGAGGT GGTTAGGCAT
CTGGCGAAGA ACCTCCCGCC GTCTGCGATG GCTAGGCTTA TGAAGATGGC TGAGGAGCAG
GCGAGGGTCA ACGAGGAGCT CGTCTGGTGG GTGGAGAAGA ACGTCTCGCT CCGCGGCTCA
GTCGCGTTGG TGGTCAACCC GCCGGGGCCG CTTGGCTTAG CCGCCAACTT GGCCAGGGGG
CTGACGGGGG CTGAGGTAGG GGTGGCGGCT GAGGCTAGAG GCGACATGTA TATTGTGAGC
CTCCGCTCCA GGGGGCTTGA CCTAAACGCC TTTCTGAGGG ATTTCGCCAG GAGATACGGC
GTTTCGGGCG GGGGCCATCC AAATGCGGCC GGGGCGAGGA TTCCAAGAGA CCTCCTCCCC
GTCCTCGTGG AGGAGCTCAG CCGCCTACGT AGATGA
 
Protein sequence
MGRVLTVFAH GDADGVCSAA VVVAALAGEY DEVEVYFTHP VDLLEDFREF ARGDVYIVDV 
AIDEKAAEEA GRVFAGYGGR VVYVDHHPLS ADLPRVEVVH EVGSSASELA YRLLGGRLPK
SYSRVALYGA ISDYMDHTPW VREALEAWDR RIIYFEAGVL MQGLERARRD HDFKREVVRH
LAKNLPPSAM ARLMKMAEEQ ARVNEELVWW VEKNVSLRGS VALVVNPPGP LGLAANLARG
LTGAEVGVAA EARGDMYIVS LRSRGLDLNA FLRDFARRYG VSGGGHPNAA GARIPRDLLP
VLVEELSRLR R