| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1363 |
|---|
| Symbol | |
|---|
| ID | 4617122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 1238298 |
|---|
| End bp | 1239149 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639784451 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_930868 |
|---|
| Protein GI | 119872861 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00078431 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGTCG TTGTTGGTCT GGGGGCGGTG GGGAGTCTCT TGGCGTATTT TCTAAACGAG
GCGGGGCTTG AGCCATATGC GGTCTCTAGG TCGAGGTGTG ATGAATATAT CTTCTGCAAT
GGCGACAGTT GCCACAAGCT TAGAGTCAAG ATGATCGATA GGGCGCCCCC CGACGTGAAG
TATAGCCTTG TTGCTGTGAA GGGGCCGGAC ACAACTGGAG CACTTAGGGT GGCTTCAGGC
GTGCCTGTAC TCTTCCAGAA CGGCATCGGG GGGCTTGAGT TGGCTCGGGA GGTGTTTCCA
AACGCCATGG CAGCCGTAGT GACCTACGGC GTATACCGGG AGGGCTGTAG GGCCGAGCTG
AGGGGCAGGG GGGAGATAAT CCTCCCGAAA GAGGCTGCGG AGGTGGGGGA GGCGCTTGCG
AGAGGCGGCG CGGCTGTGCG ACTTGTAGAC GACGTTGAGC CGTACCGCTG GGCGAAGCTT
GTTGTCAACG CCGCGATAAA CCCAGTCACA GCTATTTTGC AAGCTCCCAA TGGGGTACTG
TTGGAAAATC CCTGGGCTCG CGCCCTCGCC GAGAAGTTGG CACTAGAGGC AGCGGCTGTG
GCGGCGGCCG TGGGGTATCC AGTGGAGGGG GCTGTGGATA CCGTTTTTAC CGTGGCTAGG
GCAACTGCAA GTAACATCTC GTCTATGGCG CAAGACTTGG CCAGGTGTAG GCCTACGGAG
GTAGACTTCA TAAACGGCGC CGTGATGAAG TACGGGGCGG CGCGGGGGGT GGCGACCCCT
CATAACTATG TCGTATACAC CTTGGTCAAG GCGCTGGAGG AGAGATGCGG CTTAAGATTC
CGCACCACGT GA
|
|---|
| Protein sequence | MFVVVGLGAV GSLLAYFLNE AGLEPYAVSR SRCDEYIFCN GDSCHKLRVK MIDRAPPDVK
YSLVAVKGPD TTGALRVASG VPVLFQNGIG GLELAREVFP NAMAAVVTYG VYREGCRAEL
RGRGEIILPK EAAEVGEALA RGGAAVRLVD DVEPYRWAKL VVNAAINPVT AILQAPNGVL
LENPWARALA EKLALEAAAV AAAVGYPVEG AVDTVFTVAR ATASNISSMA QDLARCRPTE
VDFINGAVMK YGAARGVATP HNYVVYTLVK ALEERCGLRF RTT
|
|---|
| |