Gene Pisl_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1261 
Symbol 
ID4617882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1147837 
End bp1148577 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content48% 
IMG OID639784352 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_930769 
Protein GI119872762 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTAG TCGAGCGTTA TAGTAGACAA ATCCCTGTAA TTGGAGAGGA GGGCCAAGGC 
AGACTGAGGG CAACGGCTGT AGCAGTATTT GGAATCGGCG GCCTCGGCAC TTTAGTTGCT
AGATATGTGG CGGGCGGGGG GTTTAGAAAA GTCGTTGTTA TAGACCATGA CGTTGTTTCG
ATACCGGATA TACACCGCCA GATCTTATAT ACAACTAAAG ACGTGGGGAA GCCGAAGGCA
GAAGTTGCCG CTAGAGTTTT AAGCGAGGTA AATCCAGAGG TTGAGGTTGT CCCTATCGCC
GAGCCCATAA GCCCTGACTT AGCAGATAGC ATACTCAAGG AAGTAGATAT TGCTGTAGAC
GCGCTGGATA ATTGGGCGTC TAGACATGTG GTTAATAAGG CGGCGGTAAG ACATGGAAAA
CCTCTTATCC ACGGCGCAGT TCAAGAGTGG TATGGTCACG TCACCACAAT TATACCGCGA
AAAACGCCAT GTTTAGAAGA CATATTTGGG CGTTTTAAAT CGTTGCCGTC TTGTGCCATG
GGCTTCTGCC CAGTGTTAGG CCCAGCAGTA GGAGTGGTGG CTTCAATTAT GGCACTTGAG
GTTTTTAAAA CCGCACTTGG GGCGCCTTCT TTAGTAGGCA GATTATTGGT AGTAGATCTA
AAACATATGA CTTTCGACCT CTTAGAAATT GAGAGAAATC CAAACTGCCC TGTGTGCGGA
GTCTCCCACA GCATGACTTG A
 
Protein sequence
MRLVERYSRQ IPVIGEEGQG RLRATAVAVF GIGGLGTLVA RYVAGGGFRK VVVIDHDVVS 
IPDIHRQILY TTKDVGKPKA EVAARVLSEV NPEVEVVPIA EPISPDLADS ILKEVDIAVD
ALDNWASRHV VNKAAVRHGK PLIHGAVQEW YGHVTTIIPR KTPCLEDIFG RFKSLPSCAM
GFCPVLGPAV GVVASIMALE VFKTALGAPS LVGRLLVVDL KHMTFDLLEI ERNPNCPVCG
VSHSMT