Gene Pisl_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1212 
Symbol 
ID4617021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1098245 
End bp1099252 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content45% 
IMG OID639784304 
Productaminotransferase, class I and II 
Protein accessionYP_930722 
Protein GI119872715 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATAT TCGACTTCGC ATACGAAGAA CCAGACGTTG GCTATAGTAA GATTAGGCTT 
CATTTTAACG AAAATCTCTT TCTCCCAGAG GAGTATTATA GAGAGATCAT GCCGTCTGTA
GAGCCCCAAG AGCTGAGATA CTACACAGAT CCCAATAACA AGAGGTTGGC TGAAAAAATC
GAAATTTTCC ACGGCTTACC CCAAGGATCT GTTGTCGTGA CGGCCGGCGC CGATGAGGGG
CTAAGGCTTG CGATGCAGCT AAGTGTACAT ATAGACGGCG GCTTGGCTAT TGTAGAACCT
ACATATGGCA TGGCGCATGT AATAGCTCGA CAAGTTGGAC TCAAGCCGAC GGTGATTACA
TATAATAGCG ACCTATCGCT AGATATAGAT AGAGTAATTA AATCGGGGGT CTCTTCTGTG
TATATATGTT CGCCAAACAA TCCAACAGCA CATTTAGTGA AAGAGGTTGA AGAACTCGTT
GCAAGATTTA GTGGGCTGGT TATTCTTGAC AGCGCATATG CTGAGTTTGC TGGTCTATGG
ACGCCTAAGT TATACGAGTA TGGCAACGTG ATCGAAATTA GGACGTTTTC TAAAGCCTGG
GGACTTGCCG GCGCTAGAGT TGGCTATATA GTAGCTGAGA GAAAGTTAGC TCAGTCTCTT
AGAGTTTTGT CGCCGCCGCA TCCCATATCT TCTTTCTCTG CCAAGGTGAT TGAAAATGCG
CTAGAGAAGG GAAGACCCTA TGTGGAACGG TCTATACAAG CCCTCAGTGT GGTACGTGAG
TGGGTTTTGT CTAAGATTAA ACTAGAAAAG TATTACGGCC CTGTCAACTT CGTTACTGTA
AGAGTCACAA AAGCAGAGTC TATAGCGTCT AGGCTAGAGA GTGAGGGATT TGTGGTAAGA
GTATTGGGGG GTAAGCCGCT TTGTTCTTCG TGTATACGTT TTACACTAGC GCCTATGGCA
ATAATGGAGA AATTCATATT GGCGTTTGAC AAAGCATTGA AAAGTTAA
 
Protein sequence
MPIFDFAYEE PDVGYSKIRL HFNENLFLPE EYYREIMPSV EPQELRYYTD PNNKRLAEKI 
EIFHGLPQGS VVVTAGADEG LRLAMQLSVH IDGGLAIVEP TYGMAHVIAR QVGLKPTVIT
YNSDLSLDID RVIKSGVSSV YICSPNNPTA HLVKEVEELV ARFSGLVILD SAYAEFAGLW
TPKLYEYGNV IEIRTFSKAW GLAGARVGYI VAERKLAQSL RVLSPPHPIS SFSAKVIENA
LEKGRPYVER SIQALSVVRE WVLSKIKLEK YYGPVNFVTV RVTKAESIAS RLESEGFVVR
VLGGKPLCSS CIRFTLAPMA IMEKFILAFD KALKS