| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1180 |
|---|
| Symbol | |
|---|
| ID | 4617694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1071164 |
|---|
| End bp | 1071760 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639784273 |
|---|
| Product | multiple antibiotic resistance (MarC)-related protein |
|---|
| Protein accession | YP_930691 |
|---|
| Protein GI | 119872684 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTCCTT TGGAGTTTTT AGGGCTTGTA GGACAGCTTT ACGCCATTAT GAACCCAATC
GGTAAGCTCG CAGTAGTGGG GCCTCTGGCT GTTGAAAGGC CTGCATATGT AAGAAAAATC
ACCACAGTTG TAATAGCCGT TGTATACATA CTCGCCGCAA TTTTTGCAGT AAGCGGGGGA
TTTATATTGT CCGCATTTGG CGTCAGCATC AATAGTTTTA GAATAGCAGG CGGCATTGTA
TTAATGACTA TCTCAGTTAC TACCCTACTC TCTGGCTCTT ATGTAGGCAG AATTGAGATA
ACAGAGGAAC ATGCCGTTGT ACCGCTAGCA ACACCGCTTA TTGTAGGCCC AGGCACTATA
ACAGCGCTGA TAGTTATGTC ATCTATCTAC GGCCCCTTAA TAACTCTATT CATTGCGCTT
ACTGCCTCAA CAGCTGTCGC AATAACGTTG ATAGTAGGCA TCAGAGCTGT AAAATACATC
GGCGCCACCC CTCTGAGACT AGTCGGTAGA TTCATGTCGC TTATAATAGC CTCAGTCGCA
ACAGAAATGA TACTGACGGG CATTAGGAAC TATACACAAA GCCTATGTAG CAGATAA
|
|---|
| Protein sequence | MTPLEFLGLV GQLYAIMNPI GKLAVVGPLA VERPAYVRKI TTVVIAVVYI LAAIFAVSGG
FILSAFGVSI NSFRIAGGIV LMTISVTTLL SGSYVGRIEI TEEHAVVPLA TPLIVGPGTI
TALIVMSSIY GPLITLFIAL TASTAVAITL IVGIRAVKYI GATPLRLVGR FMSLIIASVA
TEMILTGIRN YTQSLCSR
|
|---|
| |